DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ph-d and si:ch211-230g15.5

DIOPT Version :9

Sequence 1:NP_524794.2 Gene:ph-d / 44889 FlyBaseID:FBgn0004860 Length:1537 Species:Drosophila melanogaster
Sequence 2:XP_017209418.1 Gene:si:ch211-230g15.5 / 556561 ZFINID:ZDB-GENE-091204-280 Length:960 Species:Danio rerio


Alignment Length:1146 Identity:245/1146 - (21%)
Similarity:388/1146 - (33%) Gaps:359/1146 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 NQPDGTQGMFIQQQPATQTLQTQQNQ-------IIQCNVTQTPTKARTQLDALAP--KQQQQQQQ 564
            :|.:||.    :..||..|:.|..||       ::|.|::.         |.|||  ...::..|
Zfish    46 HQANGTP----KTPPALTTVTTFHNQPSPTNRKVVQINLSG---------DRLAPSFSPSERVSQ 97

  Fly   565 VGTTNQTQQQQLAVATAQLQQQQQQLTAAALQRPGAPVMPHNG----TQVRPAS------SVSTQ 619
            ..::.||.:                 |.:....||:..:...|    |.||..|      ..|..
Zfish    98 ASSSQQTPK-----------------TISLPNTPGSTALVRGGQSAVTAVRKISPQTLLLGKSPS 145

  Fly   620 TAQNQSLLKAKMRNKQQPVRPALATLKTEIGQVAGQNKVVGHLTTVQQQQQ----ATNLQQVVNA 680
            |:|.|.||:|:|......|||.:..|.:.....:..:......::......    :|.||.:.  
Zfish   146 TSQAQMLLRAQMLILTSAVRPDVPALSSSFSSSSSFSSSSSSSSSTPSSSSPRFPSTQLQSLT-- 208

  Fly   681 AGNKMVVMSTTGTPITLQNGQTLHAATAAGVDKQQQQLQLFQKQHILQQQMLQQQIAAIQMQQQQ 745
                 :.....|| :|:.....|...|::    |...|..             .:|....::..|
Zfish   209 -----IRPPPPGT-LTIPPNLPLKPTTSS----QPPPLSC-------------PRIPTFHLRPSQ 250

  Fly   746 AAVQAQQQQQQQVSQQQQVNAQQQQAVAQQQQAVAQAQQQQREQQQQVAQAQAQHQQALANATQQ 810
            .|                 ||..:....:.:...:|..|.:...:.......:.:..|.|:|   
Zfish   251 PA-----------------NAPGKDGATKSESPTSQTAQTKTPVRHLTVPPPSLYAPAQAHA--- 295

  Fly   811 ILQVAPNQFITSHQQQQQQQLHNQLIQQQLQQQAQAQVQAQVQAQAQQQQQQREQQQNIIQQIVV 875
                                    |.:|:|...:..:..:|:.. .|....||....|       
Zfish   296 ------------------------LAKQKLNSSSLKRPHSQISI-PQHPFNQRHTPPN------- 328

  Fly   876 QQSTGATSQ----QQQQQPQQQSGQLQLSSVPFSVSPSMTAEDIAGITSSALQEALSVSGAIFQT 936
              |..||.:    :.::.|..|:.| .:|....|||.::.:...|.:|...|             
Zfish   329 --SPPATPKKPLPELKRCPSTQASQ-SISPQSASVSITVPSPARAHLTPPTL------------- 377

  Fly   937 TKPITCSS---STLPTSSVVTITSQSSTPLVTSSTVASMQQAQTQGTQIHQHQQLISATIAGGSQ 998
            |.|:..||   |.|.|..::.|        ..||..|.....|::...:.....||         
Zfish   378 TLPLRSSSPGGSLLATKQLLRI--------ALSSASAQCTNGQSKTATVSPPHDLI--------- 425

  Fly   999 QQQQQQQLGLPSLT----PTTP--SPTTNPILAMTSMMNATVG--HLSTAPPVSVSSTAVTPSSG 1055
               |.:.|..|.|.    ||.|  :|.|.|.|...|....|..  .|.|.||::....|..||  
Zfish   426 ---QSKPLLSPVLAKPECPTQPLLTPNTCPQLVQLSPSRQTTAATPLITTPPLASPQRASPPS-- 485

  Fly  1056 QLVTLSSASSGGGAGFPATPTKETPSKGPTATLVPIDSPKTPVSGKDTCTTPKSSTPATVSASVE 1120
                            |..|...|.|     .|.|..||.|            |.:|..::.:::
Zfish   486 ----------------PVLPLVSTSS-----ILAPPQSPLT------------SQSPTQITETLK 517

  Fly  1121 ASSSTGEALSNGDASDRSSTPSKGATTPTSKQSNAAVQPPSSTIPNSVSGKEEPKLTTC--GSLT 1183
            ......|....|...:::....| ...|..|.:.|..|     :|:..|.|...|:..|  .|.|
Zfish   518 EPKDRKEEQKQGTVPEQTPQDLK-CPAPQKKMTQAVDQ-----LPSEASEKVLNKIIVCTENSRT 576

  Fly  1184 SATSTSTTTTITNGIGVARTTASTAVSTASTTTTSSGTFTTSCTST------------------- 1229
            .....::....|:...||...|........|:|.|......|..|:                   
Zfish   577 DGQIKTSQKNETHSPSVAPWPAEKDDQCEETSTQSDNHSAISSLSSDMSPIQSSIAQPLDMSPVD 641

  Fly  1230 ----------------TTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTRQRYA 1278
                            .::|.|.:.:..........||.||||:::||||||..|||||:|....
Zfish   642 SCFPPKFHPVLERPLVQSSTLSQMKDTEGQQASGAPKPLVLTHLVEGFIIQEGLEPFPVSRSSLM 706

  Fly  1279 DKDVSD----------------EPPKKKATMQEDIKLSGIASAPGSD-----MVACEQCGKMEHK 1322
            ...|.|                |.|:......::   .|:|::.|..     ::.|:.| |.:..
Zfish   707 VGPVQDSGVNGVKEPGLIPSGSEHPEDSTDSDDE---DGVANSNGVGRAHKLVLQCQFC-KRKGT 767

  Fly  1323 AKL--KRKRYCSPGCSRQAKN-----------GIGGVGSGETNGLGTGGIVGVDAMALVDRLDEA 1374
            |:.  :.||:||..|:::...           ..||..| |.||                     
Zfish   768 AQTFPRSKRFCSKSCAKRFSYTKRFRALRRCVSEGGHRS-ELNG--------------------- 810

  Fly  1375 MAEEKMQ------TESYQTVSDALPIQAATPEVPPISMPVLAAMSTSSPLSLPL----------T 1423
             ||:...      ||.::.:           :.||..    ....||:|:...|          .
Zfish   811 -AEDSFHQAKHGATEQWRIL-----------QQPPQE----GEDGTSAPMKTRLRRHTEQERERE 859

  Fly  1424 LPLPIAIAPTVSLPVVSAGVVAPVLAIPSSNINGSDRPPISSWSVEEVSNFIRELPGCQDYVDDF 1488
            :.:...:..|.|.|      .:|:..:..::|....:|  :.|:|::||:||.:||||||..:.|
Zfish   860 IRVRHTVEETRSAP------TSPIDPVSPTDITPYPKP--AQWTVDQVSSFISKLPGCQDIAESF 916

  Fly  1489 IQQEIDGQALLLLKENHLVNAMGMKLGPALKIVAKVESIKE 1529
            ..|||||||||||.|:||::||.:||||||||.|::.|::|
Zfish   917 RAQEIDGQALLLLTEDHLMSAMNVKLGPALKICARINSLRE 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-dNP_524794.2 SAM_Ph1,2,3 1461..1529 CDD:188976 40/67 (60%)
SAM 1464..1529 CDD:197735 39/64 (61%)
si:ch211-230g15.5XP_017209418.1 SAM_Ph1,2,3 889..957 CDD:188976 40/69 (58%)
SAM 891..957 CDD:197735 40/67 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7895
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0013415
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.970

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