DRSC/TRiP Functional Genomics Resources

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Protein Alignment ph-d and Sfmbt

DIOPT Version :10

Sequence 1:NP_524794.2 Gene:ph-d / 44889 FlyBaseID:FBgn0004860 Length:1537 Species:Drosophila melanogaster
Sequence 2:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster


Alignment Length:299 Identity:62/299 - (20%)
Similarity:116/299 - (38%) Gaps:53/299 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1253 VLTHVIDG---FIIQEANEPFP---VTRQRYADKDVS-DEPPKKKATMQEDIKLSGIASAPGSDM 1310
            ::.|.::|   ...|:|.:|.|   :.|:|...|..: .:.|....|.....:...:.:.|    
  Fly   967 LVNHKLEGPPRVAHQQAPKPAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKSRTIALKTTP---- 1027

  Fly  1311 VACEQCGKMEHKAKLKRKRYCSPGCSRQAKNGIGGVGSGETNGLGTGGIVGVDAMALVDRLDEAM 1375
                ...|:..|.:||.:.:.:...........|.....:.:|.|.|....:...:......:.:
  Fly  1028 ----HLPKLSIKLELKPEHHNAAFYENNQPEEEGDEEDPDADGDGDGSTSHISEQSTTQSSSDLI 1088

  Fly  1376 AEE----------KMQTESYQTVSDALPIQAATPEVPPISMPVLAAMSTSSPLSLPLTLPLPIAI 1430
            |..          .:.|.|.:||..:.....|.|.|...:...:|..|.::...:|....:. :.
  Fly  1089 AGSGSGSGSASLVTLATGSNKTVKKSTTKSPAPPTVGRKATSYIANSSATNNKYIPRLADID-SS 1152

  Fly  1431 APTVSLPVVSAGVVAPVLAIPSSNINGSDRPPISSWSVEEVSNFIRELPGCQDYVDDFIQQEIDG 1495
            .|.:.|             :|            .:|:|.:||.|:| :..|..:.|.|.:.:|||
  Fly  1153 EPHLEL-------------VP------------DTWNVYDVSQFLR-VNDCTAHCDTFSRNKIDG 1191

  Fly  1496 QALLLLKENHLVNAMGMKLGPALKIVAKVESIK-EVPPG 1533
            :.||.|.::.::..:|||:||||||...:..:| :|.||
  Fly  1192 KRLLQLTKDDIMPLLGMKVGPALKISDLIAQLKCKVNPG 1230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-dNP_524794.2 SAM_Ph1,2,3 1461..1529 CDD:188976 25/68 (37%)
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109
MBT_dSfmbt_rpt2 674..753 CDD:439112
MBT_dSfmbt_rpt3 798..904 CDD:439115
MBT_dSfmbt_rpt4 905..976 CDD:439118 2/8 (25%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 26/78 (33%)
Blue background indicates that the domain is not in the aligned region.

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