DRSC/TRiP Functional Genomics Resources

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Protein Alignment ph-d and samd7

DIOPT Version :9

Sequence 1:NP_524794.2 Gene:ph-d / 44889 FlyBaseID:FBgn0004860 Length:1537 Species:Drosophila melanogaster
Sequence 2:XP_004914482.1 Gene:samd7 / 100496820 XenbaseID:XB-GENE-948462 Length:534 Species:Xenopus tropicalis


Alignment Length:336 Identity:77/336 - (22%)
Similarity:125/336 - (37%) Gaps:111/336 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1240 GSKDLPKAMIKPNVLTH-----VIDGFIIQEANEPFP----VTRQRYADKDVSDEPPKKKATMQE 1295
            |.:.:|:..:..:|..|     .:.|..:.:...|:|    :.|:|       ...|.::|..|:
 Frog   189 GRQMVPEGHLPSDVFVHRNAFESLHGHAMLKTASPYPSMSNLQRER-------ARRPGRRAGNQK 246

  Fly  1296 DIKLSGIAS-----------APGSD------------MVACEQCGKMEHKAKLKR--------KR 1329
            .....|:|.           ||..:            |..|:|. |.|.:..|.:        ::
 Frog   247 ATDHMGVAKIQADNKPPSPPAPTDEEKDEKKDEETGTMSKCDQI-KTEVQPALDKSSSELQDPQK 310

  Fly  1330 YCSPGCSRQAKNGIGGVGSGETNGLGTGGIVGVDAMALVDRLDEAMAEEKMQTESYQTVSDALPI 1394
            ..:....|:..||...:..|..|   ||                ...||:.   .||        
 Frog   311 MSNQNIPREIANGRSEMDKGPNN---TG----------------TAFEERY---IYQ-------- 345

  Fly  1395 QAATPEVPPISMPVLAAMSTSSPLSLPLTLPLPIAIAPTVSLPVVSAGVVAPVLAIPSSNINGSD 1459
                   ||:.:       :::|.|.|:.:..|:       || .:.|:......:||..     
 Frog   346 -------PPVHL-------SATPYSFPVAMNSPL-------LP-GTQGLFLTREDLPSVE----- 383

  Fly  1460 RPPISSWSVEEVSNFIRELPGCQDYVDDFIQQEIDGQALLLLKENHLVNAMGMKLGPALK----I 1520
              .|..|:.::|.|||..||||..|...|...:|||..|.||.|.||::.||:|||||||    |
 Frog   384 --DIRKWNSQDVYNFILNLPGCSSYAQVFKDHDIDGLTLPLLTEEHLLDTMGLKLGPALKIRSQI 446

  Fly  1521 VAKVESIKEVP 1531
            :.::.:|..:|
 Frog   447 ICRLGNIFHMP 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ph-dNP_524794.2 SAM_Ph1,2,3 1461..1529 CDD:188976 32/71 (45%)
SAM 1464..1529 CDD:197735 31/68 (46%)
samd7XP_004914482.1 SAM_Samd7,11 385..452 CDD:188978 31/66 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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