DRSC/TRiP Functional Genomics Resources

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Protein Alignment mdy and ARE2

DIOPT Version :10

Sequence 1:NP_609813.1 Gene:mdy / 44887 FlyBaseID:FBgn0004797 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_014416.1 Gene:ARE2 / 855753 SGDID:S000005302 Length:642 Species:Saccharomyces cerevisiae


Alignment Length:596 Identity:121/596 - (20%)
Similarity:232/596 - (38%) Gaps:165/596 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KVLDKDENGNGTN----GSEKKLRYRRTQS--------------------------------VTR 99
            :|::.|:|...|:    .|::|.|||:..|                                .|.
Yeast    88 EVIETDDNMFKTHVKTLSSKEKARYRQGSSNFISYFDDMSFEHRPSILDGSVNEPFKTKFVGPTL 152

  Fly   100 AEEISNKEEK---------QRRAQP------GR---------PIHRPRDSLFSWSSGF--TNFSG 138
            .:||..:|::         .|::.|      |:         |.....:::.:..:..  :||||
Yeast   153 EKEIRRREKELMAMRKNLHHRKSSPDAVDSVGKNDGAAPTTVPTAATSETVVTVETTIISSNFSG 217

  Fly   139 LVNWGFLLLCIGGLR-------------------------------------------LGLENLL 160
            |....::.:..|.::                                           :|::.|.
Yeast   218 LYVAFWMAIAFGAVKALIDYYYQHNGSFKDSEILKFMTTNLFTVASVDLLMYLSTYFVVGIQYLC 282

  Fly   161 KYGI-RINPLDWFFFISGHNEGEGHNALILSIYSLVHISLCL-AVEKGLAMEIIAEGLGLFIQIV 223
            |:|: :.....|.|               .|||..:.:...: ..|..|.:..:::   :|:.:.
Yeast   283 KWGVLKWGTTGWIF---------------TSIYEFLFVIFYMYLTENILKLHWLSK---IFLFLH 329

  Fly   224 NIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLKLWSYVQTNMWCRQTYYQKNPRERRPSI 288
            ::|:|         :|.|:|:         ||:..   ||...:...:.:....:.......|.:
Yeast   330 SLVLL---------MKMHSFA---------FYNGY---LWGIKEELQFSKSALAKYKDSINDPKV 373

  Fly   289 TLAELKKGV------LNGGEEDEDVSKLVQYPDNLTYKDLLYFLCAPTLCYELNFPRTSRVRKRF 347
             :..|:|..      |:.....:...|   :|:|::.|...:|...|||.|::.:|||..:|..:
Yeast   374 -IGALEKSCEFCSFELSSQSLSDQTQK---FPNNISAKSFFWFTMFPTLIYQIEYPRTKEIRWSY 434

  Fly   348 LLKRLLEVVIGVNVVMALFQQWIIPSVRNSLIPFSNMDVALATERLLKLA------LPNHL-CWL 405
            :|:::. .:.|...:|.:..|.::..|....:...|.:.....:||||..      :|..: .::
Yeast   435 VLEKIC-AIFGTIFLMMIDAQILMYPVAMRALAVRNSEWTGILDRLLKWVGLLVDIVPGFIVMYI 498

  Fly   406 CFFYLMFHSFLNAVGELLNFADRNFYCDWWNANNIDTFWRTWNMPVHRWCVRHLY-IPVVQMGYS 469
            ..|||::.:.||.|.||..|.||.||.||||..:...|.|.||:|||::.:||:| ..:.....:
Yeast   499 LDFYLIWDAILNCVAELTRFGDRYFYGDWWNCVSWADFSRIWNIPVHKFLLRHVYHSSMSSFKLN 563

  Fly   470 SRQASTIVFLFSAVFHEYLVSVPLQIYKIWAFMGMMGQIPLSAISKSIEKKLGPRMGNIIVWASI 534
            ..||:.:.|..|:|.||..:.|..:..:.:.|...|.|:||.|::.:...:....:||:|.|..|
Yeast   564 KSQATLMTFFLSSVVHELAMYVIFKKLRFYLFFFQMLQMPLVALTNTKFMRNRTIIGNVIFWLGI 628

  Fly   535 ILGQPLCIMAY 545
            .:|..:....|
Yeast   629 CMGPSVMCTLY 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mdyNP_609813.1 MBOAT 115..545 CDD:445070 105/505 (21%)
ARE2NP_014416.1 ARE1 106..642 CDD:227389 117/578 (20%)

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