DRSC/TRiP Functional Genomics Resources

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Protein Alignment mdy and ARE1

DIOPT Version :9

Sequence 1:NP_609813.1 Gene:mdy / 44887 FlyBaseID:FBgn0004797 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_009978.1 Gene:ARE1 / 850415 SGDID:S000000644 Length:610 Species:Saccharomyces cerevisiae


Alignment Length:501 Identity:129/501 - (25%)
Similarity:223/501 - (44%) Gaps:82/501 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 KKLRYRRTQSVTRAEEISNKEEKQRRAQ--PGRPIHRPRDSLFSWSSGFTNFSGLVNWGFLLLCI 149
            |.|:..:|::....:......||..:|.  ||..:.             :||||:..:.::.|..
Yeast   148 KNLQLTKTKTKATVKTTVKTTEKTDKADAPPGEKLE-------------SNFSGIYVFAWMFLGW 199

  Fly   150 GGLRLGLENLLKYGIRINPLDWFFFISGHNEGEGHNALILSIYSLVHISLCL------------A 202
            ..:|...:....||...|.|:...:::            ..::::..:.|.:            .
Yeast   200 IAIRCCTDYYASYGSAWNKLEIVQYMT------------TDLFTIAMLDLAMFLCTFFVVFVHWL 252

  Fly   203 VEKGLAMEIIAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTV-CFFYSVLF-LKLWSY 265
            |:|    .||......|: .|:|..|..:| ||..:..:.|.....:.: .|.:||:| :|..|:
Yeast   253 VKK----RIINWKWTGFV-AVSIFELAFIP-VTFPIYVYYFDFNWVTRIFLFLHSVVFVMKSHSF 311

  Fly   266 VQTN--MW-CRQ--TYYQKNPRERRPSI---TLAELKKGV------LNGGEEDEDVSKLVQYPDN 316
            ...|  :| .:|  .|..|..::.:.|:   |...|:|..      ||...:|.|      :|:|
Yeast   312 AFYNGYLWDIKQELEYSSKQLQKYKESLSPETREILQKSCDFCLFELNYQTKDND------FPNN 370

  Fly   317 LTYKDLLYFLCAPTLCYELNFPRTSRVRKRFLLKRLLEVVIGVNVVMALFQQWIIPSVRNSLIPF 381
            ::..:...|...|.|.|::|:|||||:|.|::|:::. .:||...:|.:..|:.:..|....|.|
Yeast   371 ISCSNFFMFCLFPVLVYQINYPRTSRIRWRYVLEKVC-AIIGTIFLMMVTAQFFMHPVAMRCIQF 434

  Fly   382 SNMDV----ALATE---RLLKLALPNH-LCWLCFFYLMFHSFLNAVGELLNFADRNFYCDWWNAN 438
            .|...    ..||:   .||...:|.. :.::..||:::.:.||.|.||..||||.||.||||..
Yeast   435 HNTPTFGGWIPATQEWFHLLFDMIPGFTVLYMLTFYMIWDALLNCVAELTRFADRYFYGDWWNCV 499

  Fly   439 NIDTFWRTWNMPVHRWCVRHLYIPVVQMG---YSSRQASTIVFLFSAVFHEYLVSVPLQIYKIWA 500
            :.:.|.|.||:|||::.:||:|..  .||   .|..||:...|..||||||..:....:..:.:.
Yeast   500 SFEEFSRIWNVPVHKFLLRHVYHS--SMGALHLSKSQATLFTFFLSAVFHEMAMFAIFRRVRGYL 562

  Fly   501 FMGMMGQIPLSAISKSIEKKLGPRMGNIIVWASIILGQPLCIMAYY 546
            ||..:.|...:|:|.:...:..|::.|::....:..| |..||..|
Yeast   563 FMFQLSQFVWTALSNTKFLRARPQLSNVVFSFGVCSG-PSIIMTLY 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mdyNP_609813.1 MBOAT 115..545 CDD:294479 122/468 (26%)
ARE1NP_009978.1 ARE1 96..610 CDD:227389 129/501 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346676
Domainoid 1 1.000 127 1.000 Domainoid score I1169
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.650022 Normalized mean entropy S2132
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003134
OrthoInspector 1 1.000 - - otm46613
orthoMCL 1 0.900 - - OOG6_101524
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2034
SonicParanoid 1 1.000 - - X3023
TreeFam 00.000 Not matched by this tool.
98.720

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