DRSC/TRiP Functional Genomics Resources

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Protein Alignment mys and itgb8

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:XP_073787461.1 Gene:itgb8 / 556752 ZFINID:ZDB-GENE-071213-3 Length:779 Species:Danio rerio


Alignment Length:860 Identity:259/860 - (30%)
Similarity:398/860 - (46%) Gaps:153/860 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QLALLMIAILAAIAGQTDAQKAAKLTAVSTCASKEKCHTCIQT-EGCAWCMQPDFKGQSRCYQNT 73
            ::.||:|::|..:.....|........:||      |..|::. ..||||.|..|...:...|..
Zfish    15 RMLLLLISVLLLLVRSNSADNRCLSALIST------CEDCLRRGPECAWCSQERFLDGAHVSQRC 73

  Fly    74 SSL-------CPEEFAYSPITVEQILVNNKLTNQYKAELAAGGGGSAMSGSSSSSYSSSSSSSSF 131
            .|:       |.|||..:|              :.|.|:             :::.|||      
Zfish    74 GSVSDLRVRGCEEEFIENP--------------KVKVEV-------------NATISSS------ 105

  Fly   132 YSQSSSGSSSASGYEEYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKS 196
                                   |:.|:.:.:.||...:.:..|...|.|.||||||||:|:|.|
Zfish   106 -----------------------QVAPREITIHLRPGSEASFVIEVQQLERYPVDLYYLVDVSAS 147

  Fly   197 MEDDKAKLSTLGDKLSETMKRITNNFHLGFGSFVDKVLMPYVSTIPKKLEHPCE----NCKAPYG 257
            |:|:..:|.|:|..||..||:.:::|.:||||||||.:.||:...|.||.:||.    :|:..:|
Zfish   148 MQDNLDRLKTVGLALSHQMKQHSSDFRVGFGSFVDKPVSPYIDVHPSKLLNPCSEYEVHCRPAHG 212

  Fly   258 YQNHMPLNNNTESFSNEVKNATVSGNLDAPEGGFDAIMQAIACRSQIGWREQARRLLVFSTDAGF 322
            :.:.:|:..|...|:..::...:|||:|.|||||||::||..|:..||||.:|:.||:..||...
Zfish   213 FIHVLPVTQNMSEFTRVIQEQRISGNMDTPEGGFDAMLQATVCQKDIGWRPEAKHLLLVMTDQPS 277

  Fly   323 HYAGDGKLGGVIAPNDGECHLSPKGEYTHSTLQDYPSISQINQKVKDNAINIIFAVTASQLSVYE 387
            |.|.|.||.|::.|:||.|||. ...|:.::..::|:::|:.:|:.:|:|..||||...|...||
Zfish   278 HLALDSKLAGIVVPHDGRCHLE-DNVYSQTSTMEHPTVAQLAEKLLENSIYSIFAVDHLQYQWYE 341

  Fly   388 KLVEHIQGSSAAKLDNDSSNVVELVKEEYRKISSSVEMKDNATGDVKITYF-----SSCLSNGPE 447
            .||:.|.||...:|...:||:.:||.:.|:|:.|.||::.......:...|     :.|......
Zfish   342 DLVDLIPGSYVGRLFPKASNLKDLVVQAYKKLLSDVEVQMELQDPQQAERFWVNVSAICPGGSSA 406

  Fly   448 VQTSKCDNLKEGQQVSFTAQIQLLKCPEDPRDWTQTIHISPVGINEVMQIQLTMLCSCPCENPGS 512
            ...|||..::..|.|.|...:.:|.||....|....:.:.|||.||.:::::..||...|.:|  
Zfish   407 AGNSKCSGVQPKQTVFFQLTVGMLSCPAGSADQDVLMLVRPVGFNESVRVRIRQLCGSGCTDP-- 469

  Fly   513 IGYQVQANSCSGHGTSMCGICNCDDSYFGNKCECSATDLTSKFANDTSCRADSTSTTDCSGRGHC 577
               :.:.:||:                      .:|:|         ||| :..:|..||.||.|
Zfish   470 ---KPEPSSCT----------------------TNASD---------SCR-EHRNTPVCSSRGVC 499

  Fly   578 VCGACECHKRPNPIEIISGKHCECDNFSCERNRNQLCSGPDHGTCECGRCKCKPGWTGSNCGCQE 642
            .||.|.|..  :....|.||.||.|:|||..:...:|.|  ||.|..|.|.|..||||..|.|:|
Zfish   500 RCGTCVCDS--SRFGNIYGKFCEMDDFSCPYDGGLVCGG--HGRCVRGECVCFSGWTGEACACRE 560

  Fly   643 SNDTCMPPGGGEICSGHGTCECGVCKCTVNDQGRFSGRHCEKCPTCSGRCQELKDCVQCQMYKTG 707
            |.|:|: ...|.||...|.|.||.|.|   |..|.||..|||||.|...||...:||.|      
Zfish   561 STDSCV-SDDGFICGDRGRCVCGKCVC---DDPRRSGAFCEKCPMCHSSCQSHWNCVNC------ 615

  Fly   708 ELKN--GDDCARNCTQFVPVGVEKV-EIDETKDEQMCKFFDEDDCKFMFKY---SEQGELH---- 762
            .|.|  |.|..:.|.|.....|:.| :|.|....:.|.:...|.|::.|..   |:..:||    
Zfish   616 HLSNGLGSDGFQLCNQSCSPLVDYVDDITELVRGKYCLYPSTDKCQYRFLMELASDGAQLHISRH 680

  Fly   763 ---VYAQENKECPAKVFMLGIVMGVIAAIVLVGLAILLLWKLLTTIHDRREFARFEKERMNAKWD 824
               |:::...:....||:|.:.:|:   .:|.|:..||      .:..|...::.|.:..:...|
Zfish   681 PVCVWSRRYFKTFLSVFLLTVTLGI---GMLAGVRQLL------RVTGRSCISKTEPQFEHTHKD 736

  Fly   825 TGENPIYKQATSTFK 839
            :...|...:.|.|::
Zfish   737 SSYVPTSSEKTITYR 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 150/476 (32%)
Integrin_B_tail 692..775 CDD:462325 23/95 (24%)
Integrin_b_cyt 803..843 CDD:462580 6/37 (16%)
itgb8XP_073787461.1 None

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