DRSC/TRiP Functional Genomics Resources

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Protein Alignment mys and itgbl1

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_001428517.1 Gene:itgbl1 / 554050 ZFINID:ZDB-GENE-050522-410 Length:486 Species:Danio rerio


Alignment Length:394 Identity:111/394 - (28%)
Similarity:138/394 - (35%) Gaps:148/394 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   431 GDVKITYFSSCLSNGPEVQTSKCDNLKEGQQVSFTAQIQL-LKCPEDPRDWTQTIHISPVGINEV 494
            ||..|.....|.          ||....|:...:..:..| .|..:|.....|.:..|..|    
Zfish    98 GDHGICNCGKCF----------CDENWFGESCQYEEECSLSSKTSKDLCRNAQGVVCSNAG---- 148

  Fly   495 MQIQLTMLC-SCPCENPGS----IGYQVQANS-----------CSGHGTSMCGICNCDDSYFGNK 543
                 |..| ||.|.||..    .|...:.:.           |.|||...||.|.|...:.|:|
Zfish   149 -----TCHCGSCMCHNPDGKSLISGRYCECDDSECLDEDSGEVCGGHGKCYCGNCYCSAGWHGDK 208

  Fly   544 CE--CSATDLTSKFANDTSCRADSTSTTDCSGRGHCVCGACECHKRPNPIEI--------ISGKH 598
            ||  |:.:...||      .|..|.....||.||.||||.|.|:      ::        |.|:.
Zfish   209 CEFQCAISPWESK------RRCTSPDGKICSNRGTCVCGECTCY------DVDPSGDWGDIHGET 261

  Fly   599 CECDNFSC----ERNRNQLCSGPDHGTCECGRCKCKPGWTGSNCG---------------CQESN 644
            ||||..||    :|..:..|||  ||.|.||||.||.||.|..|.               |:.::
Zfish   262 CECDERSCHAMYDRYSDDFCSG--HGQCNCGRCDCKEGWAGRKCDHPLSCSLSVEASQKRCRGTS 324

  Fly   645 D--------------TCMPPG-------------------GGEICSGHGTCECGVCKCTVNDQGR 676
            .              ||.|||                   .||||.|||.|.||.|.|:   .|.
Zfish   325 SLPCFGRGQCLCGQCTCHPPGDKRVHGKNCECDDRQCEDLNGEICGGHGFCSCGRCICS---DGW 386

  Fly   677 FSGRHCE--------------KCPT-----CSGR--CQELKDCVQC-----QMYKTGELKNGDDC 715
            | |:||:              .|.|     |||:  |.    |.:|     :.|.:||....|| 
Zfish   387 F-GKHCQFPRSCDMTDEQSKSLCETADGIMCSGKGSCH----CGRCICSPQEWYVSGEFCECDD- 445

  Fly   716 ARNC 719
             |.|
Zfish   446 -REC 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 15/75 (20%)
Integrin_B_tail 692..775 CDD:462325 10/33 (30%)
Integrin_b_cyt 803..843 CDD:462580
itgbl1NP_001428517.1 None
Blue background indicates that the domain is not in the aligned region.

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