DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mys and ITGB7

DIOPT Version :9

Sequence 1:NP_001284997.1 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_000880.1 Gene:ITGB7 / 3695 HGNCID:6162 Length:798 Species:Homo sapiens


Alignment Length:878 Identity:308/878 - (35%)
Similarity:448/878 - (51%) Gaps:134/878 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LALLMIAILAAIAGQTDAQKAAK--------------LTAVSTCASKEKCHTCIQTE-GCAWCMQ 60
            :||.|:.:|..:..:.:::..||              |:.:.:|.....|..||.:. .||||.|
Human     2 VALPMVLVLLLVLSRGESELDAKIPSTGDATEWRNPHLSMLGSCQPAPSCQKCILSHPSCAWCKQ 66

  Fly    61 PDF--KGQS---RCYQNTSSL---CPEEFAYSPITVEQILVNNKLTNQYKAELAAGGGGSAMSGS 117
            .:|  .|::   ||.:....|   ||.|....|...:::|.:..|                    
Human    67 LNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQPL-------------------- 111

  Fly   118 SSSSYSSSSSSSSFYSQSSSGSSSASGYEEYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEG 182
                           ||.:.|..:            .|:.||.:|:.||..|...:::.:.:|||
Human   112 ---------------SQGARGEGA------------TQLAPQRVRVTLRPGEPQQLQVRFLRAEG 149

  Fly   183 YPVDLYYLMDLSKSMEDDKAKLSTLGDKLSETMKRITNNFHLGFGSFVDKVLMPYVSTIPKNLVE 247
            ||||||||||||.||:||..::..||..|...::.:|::..:||||||||.::|:|||:|..|..
Human   150 YPVDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRH 214

  Fly   248 PC----ANCTATYGFHHQMVLDKNITQFTNEVKNATVSGNLDAPEGGFDAIMQAIACRSQIGWRE 308
            ||    ..|.:.:.|||.:.|..:...|..||...:||||||:||||||||:||..|:.||||| 
Human   215 PCPTRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWR- 278

  Fly   309 QARRLLVFSTDAGFHYAGDGKLGGVIAPNDGECHLSPKGEYTHSTLQDYPSISQINQKVKDNAIN 373
            ...|||||::|..||.||||||||:..|:||.|||...|.|:.||..||||:.|:.|.:....|.
Human   279 NVSRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQ 343

  Fly   374 IIFAVTASQLSVYEKLVEHIQGSSAAKLDNDSSNVVELVKEEYRKISSSVEMKDNA-TGDVKITY 437
            .|||||::.|.||::|.:.|..|:..:|..||||||:|:.:.|..:||:|.::.:: ...|.|:|
Human   344 PIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISY 408

  Fly   438 FSSCLSNGPEVQTSK------CDNLKEGQQVSFTAQIQLLKCPEDPRDWTQTIHISPVGINEVMQ 496
            .|.|  .|||.:..|      |::::..|.|:|...:|...|..:|    ..:.:..:|.:|.:.
Human   409 ESQC--EGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEP----HLLRLRALGFSEELI 467

  Fly   497 IQLTMLCSCPCENPGSIGYQVQANSCS-GHGTSMCGICNCDDSYFGNKCECSATDLTSKFANDTS 560
            ::|..||.|.|.:.     |.||..|| |.|...||:|:|.....|..||||..:|:|... ::.
Human   468 VELHTLCDCNCSDT-----QPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDL-ESG 526

  Fly   561 CRADSTSTTDCSGRGHCVCGACECHKRPNPIEIISGKHCECDNFSCERNRNQLCSGPDHGTCECG 625
            |||.:.:...|||:|||.||.|.|..:.      ||..||||:.||||:...||.|  .|.|:||
Human   527 CRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGILCGG--FGRCQCG 583

  Fly   626 RCKCKPGWTGSNCGCQESNDTCMPPGGGEICSGHGTCECGVCKCTVNDQGRFSGRHCEKCPTCSG 690
            .|.|....||..|.|....|:|:.|.|| :|||||.|:|..|:|.    ..:.|..|::||.|..
Human   584 VCHCHANRTGRACECSGDMDSCISPEGG-LCSGHGRCKCNRCQCL----DGYYGALCDQCPGCKT 643

  Fly   691 RCQELKDCVQCQMYKTGELKNGDDCARNCTQ------FVPVGVEKVEIDETKDEQMCKFFDEDDC 749
            .|:..:||.:|..::||.|  ..:|:..|..      ..|:..:....:.|.|.|:..|..|||.
Human   644 PCERHRDCAECGAFRTGPL--ATNCSTACAHTNVTLALAPILDDGWCKERTLDNQLFFFLVEDDA 706

  Fly   750 K----FMFKYSEQGELHVYAQENKECPAKVFMLGIVMGVIAAIVLVGLAILLLWKLLTTIHDRRE 810
            :    ...:..|:|..|..|              ||:|.:..||.|||.::|.::|...|:||||
Human   707 RGTVVLRVRPQEKGADHTQA--------------IVLGCVGGIVAVGLGLVLAYRLSVEIYDRRE 757

  Fly   811 FARFEKERMNAKWDTGENPIYKQATSTFKNPMY 843
            ::|||||:....|....||:||.|.:|..||.:
Human   758 YSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_001284997.1 INB 45..505 CDD:197563 175/479 (37%)
Integrin_B_tail 692..773 CDD:285239 21/90 (23%)
Integrin_b_cyt 803..843 CDD:285884 19/39 (49%)
ITGB7NP_000880.1 INB 50..476 CDD:197563 175/479 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..124 7/72 (10%)
Cysteine-rich tandem repeats 478..640 72/180 (40%)
VESA1_N 537..>645 CDD:289551 52/120 (43%)
EGF_2 607..635 CDD:285248 13/32 (41%)
Integrin_B_tail 645..717 CDD:285239 17/73 (23%)
Integrin_b_cyt 750..791 CDD:285884 19/41 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 262 1.000 Domainoid score I1947
eggNOG 1 0.900 - - E1_KOG1226
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 648 1.000 Inparanoid score I800
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48224
OrthoDB 1 1.010 - - D223415at33208
OrthoFinder 1 1.000 - - FOG0001086
OrthoInspector 1 1.000 - - otm41588
orthoMCL 1 0.900 - - OOG6_100678
Panther 1 1.100 - - O PTHR10082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.840

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