DRSC/TRiP Functional Genomics Resources

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Protein Alignment mys and ITGB4

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:XP_006721929.1 Gene:ITGB4 / 3691 HGNCID:6158 Length:1910 Species:Homo sapiens


Alignment Length:839 Identity:267/839 - (31%)
Similarity:403/839 - (48%) Gaps:140/839 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ERNRRCQLA---------LLMIAILAAIAGQTDAQKAAKLTAVSTCASKEKCHTCIQTE-GCAWC 58
            :..||.::|         ||:.|:::.....|.|.:..|       |..:.|..|::.: .||:|
Human    29 QEGRRKRMAGPRPSPWARLLLAALISVSLSGTLANRCKK-------APVKSCTECVRVDKDCAYC 86

  Fly    59 MQPDFKGQSRCYQNTSSLCPEEFAYSPITVEQILVNNKLTNQYKAELAAGG--GGSAMSGSSSSS 121
            ....|:.: ||  ||                            :|||.|.|  ..|.:...||..
Human    87 TDEMFRDR-RC--NT----------------------------QAELLAAGCQRESIVVMESSFQ 120

  Fly   122 YSSSSSSSSFYSQSSSGSSSASGYEEYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVD 186
            .:..:...:...:|                   |:.||.:|:.||..|:.:.::...:....|||
Human   121 ITEETQIDTTLRRS-------------------QMSPQGLRVRLRPGEERHFELEVFEPLESPVD 166

  Fly   187 LYYLMDLSKSMEDDKAKLSTLGDKLSETMKRITNNFHLGFGSFVDKVLMPYVSTIPKKLEHPCEN 251
            ||.|||.|.||.||...|..:|..|:..:.::|:::.:|||.|||||.:|.....|:||:.|..|
Human   167 LYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWPN 231

  Fly   252 CKAPYGYQNHMPLNNNTESFSNEVKNATVSGNLDAPEGGFDAIMQAIACRSQIGWREQARRLLVF 316
            ...|:.::|.:.|..:.:.|.|:::...:||||||||||||||:|...|...||||..:..||||
Human   232 SDPPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVF 296

  Fly   317 STDAGFHYAGDGK--LGGVIAPNDGECHLSPKGEYTHSTLQDYPSISQINQKVKDNAINIIFAVT 379
            ||::.|||..||.  |.|:::.||..|||...|.||....|||||:..:.:.:..:.|..|||||
Human   297 STESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVT 361

  Fly   380 ASQLSVYEKLVEHIQGSSAAKLDNDSSNVVELVKEEYRKISSSVEMK--DNATG---DVKITYFS 439
            ....|.||||..:...||...|..||||:|||::|.:.:|.|:::::  |:..|   :|....|.
Human   362 NYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRALDSPRGLRTEVTSKMFQ 426

  Fly   440 SCLSNGPEVQTSKCDNLKEGQQVSFTAQIQLLK-------C--PEDPRDWTQTIHISPVGINEVM 495
                   :.:|... :::.|:...:..|::.|:       |  |||.:.   .||:.| ..::.:
Human   427 -------KTRTGSF-HIRRGEVGIYQVQLRALEHVDGTHVCQLPEDQKG---NIHLKP-SFSDGL 479

  Fly   496 QIQLTMLCS-CPCENPGSIGYQVQANSCSGHGTSMCGICNCDDSYFGNKCECSATDLTSKFANDT 559
            ::...::|. |.||    :..:|::..||.:|..:||.|.|.:.:.|..|.||    |...::..
Human   480 KMDAGIICDVCTCE----LQKEVRSARCSFNGDFVCGQCVCSEGWSGQTCNCS----TGSLSDIQ 536

  Fly   560 SCRADSTSTTDCSGRGHCVCGACECHKRPNPIEIISGKHCECDNFSCERNRNQLCSGPDHGTCEC 624
            .|..:. ....|||||.|.||.|.|:....    ..|:.||.|||.|.|....||:  |.|.|..
Human   537 PCLREG-EDKPCSGRGECQCGHCVCYGEGR----YEGQFCEYDNFQCPRTSGFLCN--DRGRCSM 594

  Fly   625 GRCKCKPGWTGSNCGCQESNDTCMPPGGGEICSGHGTCECGVCKCTVNDQGRFSGRHCE--KCPT 687
            |:|.|:|||||.:|.|..||.||:...|| ||:|.|.||||.|.|  :.|..::...||  ....
Human   595 GQCVCEPGWTGPSCDCPLSNATCIDSNGG-ICNGRGHCECGRCHC--HQQSLYTDTICEINYSAI 656

  Fly   688 CSGRCQELKDCVQCQMYKTGELKNGDDCARNCTQFVPVGVEKVEIDETKDEQ----MCKFFDE-D 747
            ..|.|::|:.|||||.:.||| |.|..| ..|...|.:      :||.|..:    .|.|.|| |
Human   657 HPGLCEDLRSCVQCQAWGTGE-KKGRTC-EECNFKVKM------VDELKRAEEVVVRCSFRDEDD 713

  Fly   748 DCKFMFKYSEQGE------LHVYAQENKECPAKVFMLGIVMGVIAAIVLVGLAILLLWK 800
            ||  .:.|:.:|:      ..|...:.|:||...|...|.: ::..:.|:.|.:||.||
Human   714 DC--TYSYTMEGDGAPGPNSTVLVHKKKDCPPGSFWWLIPL-LLLLLPLLALLLLLCWK 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 148/479 (31%)
Integrin_B_tail 692..775 CDD:462325 31/93 (33%)
Integrin_b_cyt 803..843 CDD:462580
ITGB4XP_006721929.1 INB 72..488 CDD:197563 147/477 (31%)
I-EGF_1 492..520 CDD:465729 10/31 (32%)
EGF_2 585..608 CDD:400365 13/24 (54%)
Integrin_B_tail 661..744 CDD:462325 31/92 (34%)
Calx-beta 1025..1119 CDD:397326
fn3 1163..1243 CDD:394996
fn3 1256..1344 CDD:394996
fn3 1617..1699 CDD:394996
fn3 1730..1815 CDD:394996
Blue background indicates that the domain is not in the aligned region.

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