Sequence 1: | NP_001284997.1 | Gene: | mys / 44885 | FlyBaseID: | FBgn0004657 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005166847.1 | Gene: | itgb4 / 335269 | ZFINID: | ZDB-GENE-030131-7209 | Length: | 1931 | Species: | Danio rerio |
Alignment Length: | 825 | Identity: | 271/825 - (32%) |
---|---|---|---|
Similarity: | 387/825 - (46%) | Gaps: | 136/825 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LMIAILAAIAGQTDAQKAAKLTAVSTCASKEKCHTCIQT-EGCAWCMQPDFKGQSRC-------Y 70
Fly 71 QNTSSLCPEEFAYSPITVEQILVNNKLTNQYKAELAAGGGGSAMSGSSSSSYSSSSSSSSFYSQS 135
Fly 136 SSGSSSASGYEEYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSMEDD 200
Fly 201 KAKLSTLGDKLSETMKRITNNFHLGFGSFVDKVLMPYVSTIPKNLVEPCANCTATYGFHHQMVLD 265
Fly 266 KNITQFTNEVKNATVSGNLDAPEGGFDAIMQAIACRSQIGWREQARRLLVFSTDAGFHYAGDGK- 329
Fly 330 -LGGVIAPNDGECHLSPKGEYTHSTLQDYPSI-SQINQKVKDNAINIIFAVTASQLSVYEKLVEH 392
Fly 393 IQGSSAAKLDNDSSNVVELVKEEYRKISSSVEMK-DNATGDVKITYFSSCLSNGPEVQTSKCDNL 456
Fly 457 K--EGQQVSFTAQIQLLK-------CPEDPRDWTQTIHISPVGINEVMQIQLTMLC-SCPCE-NP 510
Fly 511 GSIGYQVQANSCSGHGTSMCGICNCDDSYFGNKCECSATDLTSKFANDTSCRADSTSTTDCSGRG 575
Fly 576 HCVCGACECHKRPNPIEIISGKHCECDNFSCERNRNQLCSGPDHGTCECGRCKCKPGWTGSNCGC 640
Fly 641 QESNDTCMPPGGGEICSGHGTCECGVCKCTVNDQGRFSGRHCEKCPTCS-------GRCQELKDC 698
Fly 699 VQCQMYKTGELKNGDDCARNCTQ--FVPVGVEKVEIDETKDEQMCKFFDE-DDCKFMFKYS---- 756
Fly 757 -EQGELHVYAQENKECPAKVFMLGIVMGVIAAIVLVGLAILLLWK 800 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mys | NP_001284997.1 | INB | 45..505 | CDD:197563 | 153/481 (32%) |
Integrin_B_tail | 692..773 | CDD:285239 | 29/88 (33%) | ||
Integrin_b_cyt | 803..843 | CDD:285884 | |||
itgb4 | XP_005166847.1 | Integrin_beta | 37..457 | CDD:278776 | 154/483 (32%) |
EGF_2 | <468..490 | CDD:285248 | 9/21 (43%) | ||
EGF_2 | 545..573 | CDD:285248 | 13/29 (45%) | ||
Integrin_B_tail | 625..709 | CDD:285239 | 30/89 (34%) | ||
Calx-beta | 991..1064 | CDD:295344 | |||
FN3 | 1242..1326 | CDD:238020 | |||
FN3 | 1331..1420 | CDD:238020 | |||
fn3 | 1640..1720 | CDD:278470 | |||
fn3 | 1751..1835 | CDD:278470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1226 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D223415at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.920 |