DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mys and Itgb7

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_038594.2 Gene:Itgb7 / 16421 MGIID:96616 Length:806 Species:Mus musculus


Alignment Length:873 Identity:309/873 - (35%)
Similarity:445/873 - (50%) Gaps:129/873 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LMIAILAAIAGQ-------TDAQKAAK-----LTAVSTCASKEKCHTCIQTE-GCAWCMQPDF-- 63
            ::|.:|....||       |.:.:||:     |:...:|.....|..||.:. .||||.|.:|  
Mouse     7 VLIFLLVLGGGQSELDTKITSSGEAAEWEDPDLSLQGSCQPVPSCQKCILSHPSCAWCKQLNFTA 71

  Fly    64 KGQS---RCYQNTSSL---CPEEFAYSPITVEQILVNNKLTNQYKAELAAGGGGSAMSGSSSSSY 122
            .|::   ||.:....|   ||.:....|...:::|.:..|                         
Mouse    72 SGEAEARRCARREELLARGCPAQELEEPRGRQEVLQDKPL------------------------- 111

  Fly   123 SSSSSSSSFYSQSSSGSSSASGYEEYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDL 187
                      ||...|..:            .|:.||.:|:.||..|....::.:.:|.||||||
Mouse   112 ----------SQGDRGEGA------------TQLAPQRIRVTLRPGEPQKFRVRFLRAAGYPVDL 154

  Fly   188 YYLMDLSKSMEDDKAKLSTLGDKLSETMKRITNNFHLGFGSFVDKVLMPYVSTIPKKLEHPC--- 249
            |||||||.||:||..::..||..|...::.:|::..:||||||||.::|:|||:|.||.|||   
Mouse   155 YYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLHHPCPSR 219

  Fly   250 -ENCKAPYGYQNHMPLNNNTESFSNEVKNATVSGNLDAPEGGFDAIMQAIACRSQIGWREQARRL 313
             |.|:.|:.:.:.:.|..:.::|..||....||||||:||||||||:||..|:.||||| ...||
Mouse   220 LERCQPPFSFHHVLSLTGDAQAFEREVGRQNVSGNLDSPEGGFDAILQAALCQEQIGWR-NVSRL 283

  Fly   314 LVFSTDAGFHYAGDGKLGGVIAPNDGECHLSPKGEYTHSTLQDYPSISQINQKVKDNAINIIFAV 378
            |||::|..||.||||||||:..|:||.|||...|.||:|...||||:.|:.|.:....|..||||
Mouse   284 LVFTSDDTFHTAGDGKLGGIFMPSDGRCHLDSNGVYTNSAEFDYPSVGQVAQALTAANIQPIFAV 348

  Fly   379 TASQLSVYEKLVEHIQGSSAAKLDNDSSNVVELVKEEYRKISSSVEMKDN-ATGDVKITYFSSCL 442
            |.:.|.||::|.:.|..|:..:|..||||||:|:.:.|..:||:|.::.: ....|.|::.|.| 
Mouse   349 TGATLPVYQELRQLIPKSAVGELSEDSSNVVQLIMDAYDSLSSTVTLEHSPLPPGVSISFESHC- 412

  Fly   443 SNGPEV------QTSKCDNLKEGQQVSFTAQIQLLKC-PEDPRDWTQTIHISPVGINEVMQIQLT 500
             .|||.      ...:|::::..|.|.|...:|...| ||     ...:.:..:|.:|.:.::|.
Mouse   413 -KGPEKTEGEAGDRGQCNDVRVNQTVDFWVTLQATHCLPE-----AHVLRLWALGFSEELTVELH 471

  Fly   501 MLCSCPCENPGSIGYQVQANSCS-GHGTSMCGICNCDDSYFGNKCECSATDLTSKFANDTSCRAD 564
            .:|.|.|.:.     |..|..|| |.|...||||:|.....|..||||..||:|... ::.|||.
Mouse   472 TVCDCNCGDA-----QPHAPYCSDGQGDLQCGICSCAPGRLGQLCECSEADLSSPDL-ESGCRAP 530

  Fly   565 STSTTDCSGRGHCVCGACECHKRPNPIEIISGKHCECDNFSCERNRNQLCSGPDHGTCECGRCKC 629
            :.:...|||:|.|.||.|.|..:.      ||:.||||:.||||:...||.|  .|.|:||.|.|
Mouse   531 NGTGPLCSGKGRCQCGRCSCSGQS------SGRLCECDDASCERHEGILCGG--FGHCQCGVCHC 587

  Fly   630 KPGWTGSNCGCQESNDTCMPPGGGEICSGHGTCECGVCKCTVNDQGRFSGRHCEKCPTCSGRCQE 694
            ....||..|.|.:|.|:|:.|.|| :|||||.|:|..|:|.    ..:.|..|::|..|...|::
Mouse   588 HANHTGRACECSKSVDSCVSPEGG-LCSGHGYCKCNRCQCL----DGYYGALCDQCLGCKSPCEQ 647

  Fly   695 LKDCVQCQMYKTGELKNGDDCARNCTQFVPVGVEKVEIDET----KDEQMCKFFDEDDCKFMF-- 753
            .:||.:|..:.||.|      |.||:    |....|.:..|    .|:..||....|:..|.|  
Mouse   648 YRDCAECGAFGTGPL------AANCS----VVCADVNVTLTLAPNLDDGWCKERTIDNQLFFFLV 702

  Fly   754 KYSEQG-ELHVYAQENKECPAKVFMLGIVMGVIAAIVLVGLAILLLWKLLTTIHDRREFARFEKE 817
            :::..| .|.|..||......:..:||...|::|    |||.::|.::|...|:||||:.|||||
Mouse   703 EHAASGIVLRVRPQEKGVDHTRAIILGCTGGIVA----VGLGLVLAYRLSVEIYDRREYRRFEKE 763

  Fly   818 RMNAKWDTGENPIYKQATSTFKNPMYAG 845
            :....|....||:||.|.:|..||.:.|
Mouse   764 QQQLNWKQDNNPLYKSAITTTVNPRFQG 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 172/480 (36%)
Integrin_B_tail 692..775 CDD:462325 24/89 (27%)
Integrin_b_cyt 803..843 CDD:462580 19/39 (49%)
Itgb7NP_038594.2 INB 50..476 CDD:197563 172/480 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..123 6/71 (8%)
I-EGF_1 476..506 CDD:465729 13/34 (38%)
EGF_2 612..635 CDD:400365 10/26 (38%)
Integrin_B_tail 645..716 CDD:462325 22/80 (28%)
Integrin_b_cyt 749..789 CDD:462580 19/39 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 786..806 3/6 (50%)

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