DRSC/TRiP Functional Genomics Resources

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Protein Alignment mys and itgb7

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:XP_002936686.2 Gene:itgb7 / 100486332 XenbaseID:XB-GENE-1012435 Length:766 Species:Xenopus tropicalis


Alignment Length:26 Identity:8/26 - (30%)
Similarity:14/26 - (53%) Gaps:4/26 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 FKDVVFKGRHTRSRSKSQKQDDESVP 211
            |.|.:|:    ...:.|.:|::|.||
 Frog   197 FMDEIFQ----ELENFSLEQEEEDVP 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 8/26 (31%)
Integrin_B_tail 692..775 CDD:462325
Integrin_b_cyt 803..843 CDD:462580
itgb7XP_002936686.2 vWFA 30..455 CDD:469594 8/26 (31%)
Integrin_B_tail 620..693 CDD:462325
Integrin_b_cyt 724..764 CDD:462580
Blue background indicates that the domain is not in the aligned region.

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