powered by:
Protein Alignment rhi and Skadu
DIOPT Version :10
| Sequence 1: | NP_536794.1 |
Gene: | rhi / 44879 |
FlyBaseID: | FBgn0004400 |
Length: | 418 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001162985.1 |
Gene: | Skadu / 8673966 |
FlyBaseID: | FBgn0259922 |
Length: | 133 |
Species: | Drosophila melanogaster |
| Alignment Length: | 97 |
Identity: | 22/97 - (22%) |
| Similarity: | 34/97 - (35%) |
Gaps: | 25/97 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 159 TSQVSTDSTEVFDGNPSATTTNMIKSPRIQSLFSDLNLIEPTKDKDVGDTSLKTPP--------- 214
|..:||.| |.:|....:|.| ::...|||..:.|....|..:...:...
Fly 23 TCNLSTIS-------PRSTLVQTVKKP-VKKFSSDLANLPPVPAIDAFERGYQVESILDMVQNIH 79
Fly 215 -------KSRRLIEFPQREDAPLSSKHVSPML 239
|...||| |:.....|:.:||..:|
Fly 80 KEQFLYIKFTNLIE-PELVPLELALQHVPHLL 110
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| rhi | NP_536794.1 |
CD_Rhino |
23..73 |
CDD:349280 |
|
| CSD |
362..411 |
CDD:349275 |
|
| Skadu | NP_001162985.1 |
CSD |
66..116 |
CDD:349275 |
9/46 (20%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Return to query results.
Submit another query.
