DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rhi and cdyl

DIOPT Version :9

Sequence 1:NP_536794.1 Gene:rhi / 44879 FlyBaseID:FBgn0004400 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_696879.5 Gene:cdyl / 568457 ZFINID:ZDB-GENE-070912-561 Length:581 Species:Danio rerio


Alignment Length:324 Identity:72/324 - (22%)
Similarity:125/324 - (38%) Gaps:79/324 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EEYVVEKILGKR-FVNGRPQVLVKWSGFPNENNTWEPLENVGNCMKLVSDFESEVFRLH--RKAA 83
            |.|.||:|:||| ...|:.:.||:|.|:..|.:||||..::.:|::.:.:|.    |.|  ::..
Zfish     6 ELYEVERIIGKRKNKKGKTEYLVRWRGYSFEGDTWEPEGHLSSCIEFIHEFN----RQHSEKQKD 66

  Fly    84 AKSVGKSKSSPSSSGPLIT-------ENGPSSSKKTQQHS----------KSVQAKNTAGMS-KM 130
            ...:..::||||::...|.       ...||::..|.:.|          :...|:|::..| ..
Zfish    67 GTLLRSTRSSPSTANTSINARKQISRPQHPSANSNTAKTSTPTPNTHPTKRPQPAQNSSNDSDSP 131

  Fly   131 NQKKGKNIKKTAGKIKDIENYPKTQMPSTSQVSTDSTEVFDGNPSATTTNMIKSPRIQSLFSDLN 195
            .||:|    ::||               ||.:....||      :|.|.....:|.:.:|     
Zfish   132 QQKRG----RSAG---------------TSSIMGTVTE------TAPTAAPAAAPTVSAL----- 166

  Fly   196 LIEPTKDKDVGDTSL-----KTPPKSRRLIEFPQREDAPLSSKH------VSPMLIRKESQPLQS 249
                .:..|:..:.:     |:|..||     ...|::|..:.|      ..|..:..|...|:.
Zfish   167 ----RRSMDLSKSGIKILVPKSPMNSR-----ADTEESPSEAAHSLEQGSQEPDAVPPEVALLEK 222

  Fly   250 SCTDDSDLGESSSSM-SLPTVSSTSSEKSIKVTKSEPKTL---GQIKFSSRSSDGGHAASSLGA 309
            ........||..:.| :.|...:......|.:|.:..:||   |.......||..|.|.:...|
Zfish   223 PAGAMRVPGEERARMGTRPRTQTALPPPQIPITPAAVRTLNGKGVTTLMEASSANGTAITQSAA 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rhiNP_536794.1 CHROMO 22..72 CDD:237991 19/50 (38%)
ChSh 357..411 CDD:294039
cdylXP_696879.5 CHROMO 8..61 CDD:214605 20/56 (36%)
crotonase-like 327..523 CDD:119339
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.