DRSC/TRiP Functional Genomics Resources

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Protein Alignment rhi and Cdyl

DIOPT Version :10

Sequence 1:NP_536794.1 Gene:rhi / 44879 FlyBaseID:FBgn0004400 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_017456089.1 Gene:Cdyl / 361237 RGDID:1549745 Length:617 Species:Rattus norvegicus


Alignment Length:209 Identity:58/209 - (27%)
Similarity:86/209 - (41%) Gaps:49/209 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EYVVEKILGKR-FVNGRPQVLVKWSGFPNENNTWEPLENVGNCMKLVSDF---------ESEVFR 77
            |..||.|:.|| ...|:.:.||:|.|:.:|::||||.:::.||.:.:.||         |..:.|
  Rat    54 ETQVESIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHNERQKEGTLAR 118

  Fly    78 LHRKA---AAKSVGKS-KSSPSSSGPLITENGPSSSKKTQQHSKSVQ--AKNTAGMSKMNQKKGK 136
            .:|.:   |.|.:.:| .|:.|.:.|.....|.....||.|...:.|  .||||  ..:..:|..
  Rat   119 ANRASPSNARKQISRSTHSALSKTNPKALVVGKDHESKTNQLLATSQKFRKNTA--PSLANRKNM 181

  Fly   137 NIKKTAGKIKDIENYPKTQMPSTSQVSTD-----STEVFDG--------------------NPSA 176
            ::.|:..||.    .||:  |...:.|.|     |.|..|.                    .|.|
  Rat   182 DLAKSGIKIL----VPKS--PIKGRTSIDGFHGESPEKLDQGAEDTVTPEVTAEKPTGALLGPGA 240

  Fly   177 TTTNMIKSPRIQSL 190
            ....|...|||.||
  Rat   241 ERARMGSRPRIHSL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rhiNP_536794.1 CD_Rhino 23..73 CDD:349280 20/59 (34%)
CSD 362..411 CDD:349275
CdylXP_017456089.1 CD_CDY 56..105 CDD:349284 19/48 (40%)
crotonase-like 363..559 CDD:119339
Blue background indicates that the domain is not in the aligned region.

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