Sequence 1: | NP_536794.1 | Gene: | rhi / 44879 | FlyBaseID: | FBgn0004400 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006242056.1 | Gene: | Cbx6 / 315136 | RGDID: | 1307314 | Length: | 414 | Species: | Rattus norvegicus |
Alignment Length: | 398 | Identity: | 82/398 - (20%) |
---|---|---|---|
Similarity: | 148/398 - (37%) | Gaps: | 111/398 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 YVVEKILGKRFVNGRPQVLVKWSGFPNENNTWEPLENVGNCMKLVSDFES--------------- 73
Fly 74 --EVFRLHRKAAAKSVGKS------KSSPSSSGPLITENGPSSSKKTQQHSKSVQAKNTAGMSKM 130
Fly 131 NQK-------KGKN------IKKTAGKIKDIENYPKTQMPSTSQVSTDSTEVFD----GNPSATT 178
Fly 179 TNMIKSPRIQS---------LFSDLNLIEPTKDKDVGDTSLKTPPKSRRLIEFPQREDAPLSSKH 234
Fly 235 VSPMLIRKESQPLQSSCTDDSDLGESSSSMSLPTVSSTSSEKSIKVTKSEPKTLGQIKFSSRSSD 299
Fly 300 GGHAASSLGAPKEG---------DIG----------LDLSGSDSMDSEVESMRRCPRRKRKKTYP 345
Fly 346 DWKFPEMT 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rhi | NP_536794.1 | CHROMO | 22..72 | CDD:237991 | 17/47 (36%) |
ChSh | 357..411 | CDD:294039 | |||
Cbx6 | XP_006242056.1 | CHROMO | 10..62 | CDD:214605 | 19/51 (37%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1628171at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |