Sequence 1: | NP_536794.1 | Gene: | rhi / 44879 | FlyBaseID: | FBgn0004400 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001029250.1 | Gene: | Cbx8 / 303731 | RGDID: | 1565375 | Length: | 366 | Species: | Rattus norvegicus |
Alignment Length: | 328 | Identity: | 75/328 - (22%) |
---|---|---|---|
Similarity: | 118/328 - (35%) | Gaps: | 78/328 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 YVVEKILGKRFVNGRPQVLVKWSGFPNENNTWEPLENVGNCMKLVSDFESEVFRLHRKAAAKSVG 88
Fly 89 KSKSSPSSSGPLITENGPSSSKKTQQHSKSVQAKNTAGMSKMNQKKGKNIKKTAGKIKDIENYPK 153
Fly 154 TQMPSTSQVSTDSTEVFDGNPSATTTNMIKSPRIQSLFSDLNLIEPT-----KDKDVGDTSLKTP 213
Fly 214 PKSRR-LIEFPQR------------------EDAP-----LSSKHVSPMLIRKESQPLQSSCTDD 254
Fly 255 SDL------GESSSSMSLPTVSSTSSEKSIKVTKSEPKTLGQIKFSSRSSDGGHAASSLGAPKEG 313
Fly 314 DIG 316 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rhi | NP_536794.1 | CHROMO | 22..72 | CDD:237991 | 17/47 (36%) |
ChSh | 357..411 | CDD:294039 | |||
Cbx8 | NP_001029250.1 | CD_polycomb_like | 11..59 | CDD:349277 | 19/54 (35%) |
CBX7_C | 326..358 | CDD:407338 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1628171at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |