DRSC/TRiP Functional Genomics Resources

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Protein Alignment rhi and cec-6

DIOPT Version :9

Sequence 1:NP_536794.1 Gene:rhi / 44879 FlyBaseID:FBgn0004400 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_500828.1 Gene:cec-6 / 177338 WormBaseID:WBGene00020463 Length:891 Species:Caenorhabditis elegans


Alignment Length:478 Identity:98/478 - (20%)
Similarity:154/478 - (32%) Gaps:158/478 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NDHVEEYVVEKILG--------KRFVNGRPQ-----------------VLVKWSGFPNENNTWEP 57
            :|...||:|.::|.        ::.:|...:                 .||.|.|:..:..||||
 Worm     3 HDSSGEYMVSQVLKCVKFKDLVRKALNAEAKFSPASVEYDKRRHSKYAYLVHWRGYDWKERTWEP 67

  Fly    58 LENVGNCMKLVS----------------DFESEVFRLHRKAAAKSVGKSKSSPSSSGPLITENGP 106
            .||:.||.:|..                .:|...:|....|:.|.|..........   |.|...
 Worm    68 EENLENCEELQKFKERNNMSLDHLTFEHHYEHSTWRRISLASEKCVTNRYLKTDDE---IEEKRA 129

  Fly   107 SSSKKTQQHSKSVQAKNTAGMSK----MNQKKGKNIKKTAGKIKDIENYPKTQMPSTSQVSTDST 167
            ....|.::.::..||||....::    :.:||.:.:.....||.|.|. ..|...|:|.|||...
 Worm   130 RKKAKLEEQNRKEQAKNPHASAETEPAVKKKKIEGVGSRIPKISDREG-AGTSGQSSSNVSTPGI 193

  Fly   168 EVFDGNPSATTTNMIKSPRIQSLFSDLNLIEPTKDKDVGDTSLKTPPKSRRLIEFPQREDAPLSS 232
            ...|.          |:||:|.           |..::|..|.            |:...|.||.
 Worm   194 TPLDN----------KTPRMQK-----------KSNEIGQAST------------PECAIATLSI 225

  Fly   233 KHVSPMLIRKESQPLQSSCTDDSDLGESSSSMSLPTVSSTSSEKSIKVTKSEPKTLGQIKFSSRS 297
            ....|.:|        .|..|.||:...|                   |..:|:.:.:.|.:   
 Worm   226 GTPQPSII--------DSTYDQSDIANGS-------------------TSPQPQPVFKRKMN--- 260

  Fly   298 SDGGHAASSLGAPKEGDI--GLDLSGSDSMDSE---------------VESMR-RCPR-RKRKKT 343
               |...|.....:.|..  |..:.||.|.:||               :||.| .|.. .|..|.
 Worm   261 ---GQDVSDYSVHQGGTFSDGSAIEGSTSRESEDMDCTQETKKALQKAIESAREECEEIEKTIKK 322

  Fly   344 YPDWKFPEMTKP---FGVNRGLDLDKILHCYQM-------NDDLFMFVTWKGCSS---IDAVHIN 395
            ||    .::|..   .|.:..|.|.|...|..:       |::..|.:..|...:   :||    
 Worm   323 YP----LQVTSSRVVTGFSPALTLRKFRRCQSLEMLSDHFNNNAEMEIFGKNFENSVRLDA---- 379

  Fly   396 DIKEAYPLQIIKYFESLRIIVPK 418
               :|.|:.|..|.:...:.:.|
 Worm   380 ---DAKPVVIKIYPQEQELFLTK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rhiNP_536794.1 CHROMO 22..72 CDD:237991 18/90 (20%)
ChSh 357..411 CDD:294039 14/63 (22%)
cec-6NP_500828.1 Mating_C 123..>278 CDD:372279 44/224 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22812
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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