DRSC/TRiP Functional Genomics Resources

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Protein Alignment sub and AT1G72250

DIOPT Version :10

Sequence 1:NP_611260.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001320541.1 Gene:AT1G72250 / 843557 AraportID:AT1G72250 Length:1216 Species:Arabidopsis thaliana


Alignment Length:654 Identity:166/654 - (25%)
Similarity:260/654 - (39%) Gaps:181/654 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RREVRSFLMARDPSIDRRFRPRPNKKMRLFDN-------IQESEEESFSEYSDTESEYKYQSSEA 68
            :.:.|.|...||  :.|:.:....::::|.:.       :|:..|.|    |..:|..| |.:|.
plant   427 KEKSRWFSSLRD--LTRKLKIMKVEQIKLLEEATTYKHLVQDINEFS----SHIQSRVK-QDAEL 484

  Fly    69 TEGASCATSAADSSNVET---------GPQVFLRLRPVKDASKAYIVSEEANVLITSCKVDSTSN 124
            .|.......|.:....|.         ..:||.|.||:.      ....||.|.: ...|:||.|
plant   485 HENLKVKFVAGEKERKELYNKILELKGNIRVFCRCRPLN------FEETEAGVSM-GIDVESTKN 542

  Fly   125 -NVNRM-----EKHFGFTSIFDSTVGQRDIY-DTC-VGPKIMEEECVTIMTYGTSGSGKTYTLLG 181
             .|..|     :|.|.|.|:|.....|.|:: ||. ....:::...|.|..||.:|:|||:|:.|
plant   543 GEVIVMSNGFPKKSFKFDSVFGPNASQADVFEDTAPFATSVIDGYNVCIFAYGQTGTGKTFTMEG 607

  Fly   182 DDVRAGIIPRALENIFTIYQDTVFRSPKLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHH 246
            .....|:..|.|||:|.|                                          |.|..
plant   608 TQHDRGVNYRTLENLFRI------------------------------------------IKARE 630

  Fly   247 QRLKQVIDGDHMFETKASTDVSVLVWVSFVEIYNELVYDLL------AIPPKQDKLGEVPRKNLK 305
            .|....|.                  ||.:|:|||.:.|||      |..||:.::.::      
plant   631 HRYNYEIS------------------VSVLEVYNEQIRDLLVPASQSASAPKRFEIRQL------ 671

  Fly   306 IVGNKGHVFIKGLTSVFVTSSEEALRLLRLGQQRSTYASTSVNANSSRSHCVFTVDILKYN-RSG 369
               ::|:..:.||....|.|.||...:|:.|........|:.|.:||||||:..|.:...| .:|
plant   672 ---SEGNHHVPGLVEAPVKSIEEVWDVLKTGSNARAVGKTTANEHSSRSHCIHCVMVKGENLLNG 733

  Fly   370 ITTQSSYKFCDLAGSERVNNTGTSGLRLKEAKNINTSLMVLGRCLDAASTVQKKKNADIIPYRDS 434
            ..|:|.....||||||||..|...|.||||.:|||.||..||..:.|.:     ..:..||:|:|
plant   734 ECTKSKLWLVDLAGSERVAKTEVQGERLKETQNINKSLSALGDVIFALA-----NKSSHIPFRNS 793

  Fly   435 KLTMLLQAALLGKEKLAMIVTVTPLDKYYEENLNVLNFASIAKNIIFKEPVIKQHRVSYCGFMEF 499
            |||.|||.:|.|..|..|.|.::|.:....|.|..|||||..:.|                    
plant   794 KLTHLLQDSLGGDSKTLMFVQISPNENDQSETLCSLNFASRVRGI-------------------- 838

  Fly   500 SKMSTCEGGDYTKELEDENVRLQLEIEQLKYDHVLQMQLLEEKLRRELTATYQEIIQNNKKQYED 564
                  |.|...|:|::        .|.|||..::      ||.::::....::|.:..:..|..
plant   839 ------ELGPAKKQLDN--------TELLKYKQMV------EKWKQDMKGKDEQIRKMEETMYGL 883

  Fly   565 ECEKKLLIAQRESEFMLSSQRRRYEEQIEDLKDEI---EELKNPASDTDIS---------DDPNE 617
            |.:    |.:|:      ::.:..::::::|:.::   .:|.....||.|:         |:.|.
plant   884 EAK----IKERD------TKNKTLQDKVKELESQLLVERKLARQHVDTKIAEQQTKQQTEDENNT 938

  Fly   618 SKSP 621
            ||.|
plant   939 SKRP 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subNP_611260.1 KISc 89..477 CDD:276812 123/402 (31%)
GBP_C <512..603 CDD:293879 14/93 (15%)
coiled coil 576..586 CDD:293879 0/9 (0%)
coiled coil 592..603 CDD:293879 1/13 (8%)
AT1G72250NP_001320541.1 Malectin 173..316 CDD:432024
CENP-F_leu_zip <355..465 CDD:463102 6/39 (15%)
KISc_C_terminal 510..840 CDD:276817 124/436 (28%)
Blue background indicates that the domain is not in the aligned region.

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