DRSC/TRiP Functional Genomics Resources

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Protein Alignment sub and AT2G21300

DIOPT Version :10

Sequence 1:NP_611260.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_179726.2 Gene:AT2G21300 / 816669 AraportID:AT2G21300 Length:862 Species:Arabidopsis thaliana


Alignment Length:626 Identity:144/626 - (23%)
Similarity:242/626 - (38%) Gaps:207/626 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 VFLRLRPVKDASKAYIVSEEANVLITSCKVDSTSNNVNRMEK------HFGFTSIFDSTVGQRDI 148
            |.:||||:.:  |..:.:|.|:   ..|..|:|....|.:.:      .:.|..::......|.:
plant    27 VLVRLRPLNE--KEILANEAAD---WECINDTTVLYRNTLREGSTFPSAYSFDRVYRGECPTRQV 86

  Fly   149 YDTCVGPKIMEEECV-----TIMTYGTSGSGKTYTLLGDDVRAGIIPRALENIFTIYQDTVFRSP 208
            |:.  |||.:....|     :|..||.:.||||||:      :||...|:.:||    |.:|:  
plant    87 YED--GPKEVALSVVKGINSSIFAYGQTSSGKTYTM------SGITEFAVADIF----DYIFK-- 137

  Fly   209 KLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFETKASTDVSVLVWV 273
                                                 |:        |..|..|.|.        
plant   138 -------------------------------------HE--------DRAFVVKFSA-------- 149

  Fly   274 SFVEIYNELVYDLLAIPPKQDKLGEVPRKNLKIVGNKGHVFIKGLTSVFVTSSEEALR------- 331
              :|||||.:.|||:......:|.:.|.|...:                ..::||.||       
plant   150 --IEIYNEAIRDLLSPDSTPLRLRDDPEKGAAV----------------EKATEETLRDWNHLKE 196

  Fly   332 LLRLGQQRSTYASTSVNANSSRSHCVFTVDILKYNR------SGITTQSSYKFCDLAGSERVNNT 390
            |:.:.:.:.....||:|..|||||.:..:.:....|      :..|..:|..|.|||||||.:..
plant   197 LISVCEAQRKIGETSLNERSSRSHQIIKLTVESSAREFLGKENSTTLMASVNFIDLAGSERASQA 261

  Fly   391 GTSGLRLKEAKNINTSLMVLGRCLDAASTVQKKKNA--DIIPYRDSKLTMLLQAALLGKEKLAMI 453
            .::|.||||..:||.||:.||      :.::|..|.  ..|.|||||||.:||..|.|..:.|::
plant   262 LSAGARLKEGCHINRSLLTLG------TVIRKLSNGRQGHINYRDSKLTRILQPCLGGNARTAIV 320

  Fly   454 VTVTPLDKYYEENLNVLNFASIAKNIIFKEP--VIKQHRVSYCGFMEFSKMSTCEGGDYTKELED 516
            .|::|...:.|:..|.|.||..||.:..|..  |:...:.                  ..|:|:.
plant   321 CTLSPARSHVEQTRNTLLFACCAKEV
TTKAQINVVMSDKA------------------LVKQLQR 367

  Fly   517 ENVRLQLEIEQ--------------LKYDHVLQMQLLEEKL-----RRELTAT----YQEIIQ-- 556
            |..||:.|:..              .|.|  ||:|.:|::|     :|::..:    :.::::  
plant   368 ELARLESELRNPAPATSSCDCGVTLRKKD--LQIQKMEKQLAEMTKQRDIAQSRLEDFMKMVEHD 430

  Fly   557 -----------NNKKQYEDECEKKL--LIAQRESEFM-------LSSQR---------------- 585
                       |...::||....::  ::....:.|:       ||:.|                
plant   431 ASSKAGTPHFRNRTNKWEDGSVSEISGVVDPDRTSFISDGTSTPLSTARAHVRSHSDDDLEEEMS 495

  Fly   586 -RRYEEQIEDLKDEIEELKNPASDTDISDDPNESKSPIEIL 625
             |...:|.|:...|::.::...|..||::| :|.::..|.|
plant   496 PRHSGDQSEEYCKEVQCIEMEESTRDINND-SEERTDAETL 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subNP_611260.1 KISc 89..477 CDD:276812 108/412 (26%)
GBP_C <512..603 CDD:293879 25/152 (16%)
coiled coil 576..586 CDD:293879 4/33 (12%)
coiled coil 592..603 CDD:293879 2/10 (20%)
AT2G21300NP_179726.2 KISc_CENP_E 24..346 CDD:276825 110/414 (27%)
DUF3490 684..844 CDD:463424
Blue background indicates that the domain is not in the aligned region.

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