DRSC/TRiP Functional Genomics Resources

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Protein Alignment sub and Kif7

DIOPT Version :10

Sequence 1:NP_611260.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001419074.1 Gene:Kif7 / 293047 RGDID:1310310 Length:1341 Species:Rattus norvegicus


Alignment Length:422 Identity:135/422 - (31%)
Similarity:191/422 - (45%) Gaps:105/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 SNVETGP-QVFLRLRPV--KDASKAYIVSEEANVLITSC-KVDSTSNNVN-RMEKHFGFTSIFDS 141
            |..|..| :|.||:||:  |:....:          .|| :|:.....:. ..::||||..:...
  Rat     9 SGAEEAPVRVALRVRPLLPKELLHGH----------QSCLQVEPERGRITLGRDRHFGFHVVLGE 63

  Fly   142 TVGQRDIYDTCVGPKI---MEEECVTIMTYGTSGSGKTYTL-------LGDDVRAGIIPRALENI 196
            ..||..:|..||.|.:   .|....|:..||.:|||||||:       |.:| ..||||||:...
  Rat    64 DAGQEAVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLHED-EQGIIPRAMAEA 127

  Fly   197 FTIYQDTVFRSPKLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFET 261
            |             |||:      ::|           ||| |                      
  Rat   128 F-------------KLID------END-----------LLD-C---------------------- 139

  Fly   262 KASTDVSVLVWVSFVEIYNELVYDLLAIPPKQDKLGEVPRKNLKIVGNKGHVFIKGLTSVFVTSS 326
                    ||.||::|:|.|...|||       ::|...|.......::|:|.:.|:..|.|...
  Rat   140 --------LVHVSYLELYKEEFRDLL-------EVGTASRDIQLREDDRGNVVLCGVKEVDVEGL 189

  Fly   327 EEALRLLRLGQQRSTYASTSVNANSSRSHCVFTVDILKYNR---------SGITTQSSYKFCDLA 382
            :|.|.||.:|.......:|..|..|||||.||||.:.:..|         :|....|.:.|.|||
  Rat   190 DEVLSLLEMGNAARHTGATHFNRLSSRSHTVFTVTLEQRGRAPTRLPRPGAGHLLVSKFHFVDLA 254

  Fly   383 GSERVNNTGTSGLRLKEAKNINTSLMVLGRCLDAASTVQKKKNADIIPYRDSKLTMLLQAALLGK 447
            |||||..||::|.||||:..||::|:.||..:.|....|::  ...|||||||:|.:|:.:|.|.
  Rat   255 GSERVLKTGSTGERLKESIQINSTLLALGNVISALGDPQRR--GSHIPYRDSKITRILKDSLGGN 317

  Fly   448 EKLAMIVTVTPLDKYYEENLNVLNFASIAKNI 479
            .|..||..|:|....::|.||.||:||.|:||
  Rat   318 AKTVMIACVSPSSSDFDETLNTLNYASRAQNI 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subNP_611260.1 KISc 89..477 CDD:276812 129/410 (31%)
GBP_C <512..603 CDD:293879
coiled coil 576..586 CDD:293879
coiled coil 592..603 CDD:293879
Kif7NP_001419074.1 KISc_KIF4 15..350 CDD:276823 133/416 (32%)
Smc <700..>1196 CDD:440809
Blue background indicates that the domain is not in the aligned region.

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