DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and mpp3b

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_001340190.2 Gene:mpp3b / 799884 ZFINID:ZDB-GENE-121214-128 Length:587 Species:Danio rerio


Alignment Length:647 Identity:218/647 - (33%)
Similarity:341/647 - (52%) Gaps:109/647 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1417 PLHHSSLGLQKDIVELLTQSNTAA-----AIELGNLLTSHEMEGLLLAHDRIAN-HTDGTPSPTP 1475
            |:...:.||.:.:..|.:|.:..|     .:.|..:.:...:..|:..|:|:.. |       ..
Zfish     2 PVLSPTTGLHEMLALLTSQLHPEANHKEDLVFLREVFSERSLSYLMKIHERLRQFH-------LY 59

  Fly  1476 TPTPAIGAATGSTLSSPVAGPKRN----------LGMVVPPPV-----VPPPLAQRGAMPLPRGE 1525
            :|||.:.:|  |.|:..||...:|          |.::..|.:     |...:||:...|:    
Zfish    60 SPTPVLHSA--SCLAEDVAEELQNGSLEEDERELLALLSTPHIKAVLTVHDTVAQKNFEPV---- 118

  Fly  1526 SPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKSTEPLGATVRNE--GEAVVIG 1588
                  :|||   |..:...|           :.::::|:::.|:.||||||:|.:  ..|||:.
Zfish   119 ------LPPL---PNDLEDEL-----------EEESVKIVRLVKNKEPLGATIRRDEVTGAVVVA 163

  Fly  1589 RIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGG 1653
            ||:|||||::|||:|.|||:.||||..:..|...|:..:|...||::|..|:||.....      
Zfish   164 RIMRGGAADRSGLVHVGDELREVNGNLIIHKRPEEISQILSQSQGSITLKIIPAIKEED------ 222

  Fly  1654 TTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQAYR 1718
                       ..:::.| ::||.|||.|.:|...||:|.|:.|..||||.|:|::||.||||.|
Zfish   223 -----------RFKESKV-YLRALFDYTPYEDRATPCQEAGLPFLCGDVLQVVSQDDPTWWQAKR 275

  Fly  1719 EGEEDQTLAGLIPSQSFQHQR--ETMKLAIAEEAGLARSRGKDG-------------SGSKGATL 1768
            .|:.: ..||||||:.||.:|  ..||:...:.....|:...|.             ||...|.|
Zfish   276 VGDSN-LRAGLIPSRQFQERRLLYRMKMGTHQSPKSPRATPCDQTCEKEDCDSESSVSGQHVAGL 339

  Fly  1769 LCA-RKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVALYYPRATHK-RPIVLIGPPNIG 1831
            ..: |..||..:.::.|:..|        |:...|.|.||||.|:..|...| |.:||||.....
Zfish   340 RRSFRLSRKDHQGSNKESHTP--------ESTENEFLIYEEVTLHQMRLQDKPRLVVLIGSLGAR 396

  Fly  1832 RHELRQRLMADS-ERFSAAVPHTSRARREGEVPGVDYHFITRQAFEADILARRFVEHGEYEKAYY 1895
            .:||:|:::|:: :|:..|||||:|.|:..|..||:||||::|||:|||.:.:|:|:|||:...|
Zfish   397 INELKQKVIAENPQRYGVAVPHTTRPRKSHEKEGVEYHFISKQAFDADIQSNKFIEYGEYKNNQY 461

  Fly  1896 GTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAP--PSLDKLRQ-----KKLRNGE 1953
            |||||:||:|:|..|:|::::.|::||:||.|:.||||:.|.|  |.:.:.|.     ::..||.
Zfish   462 GTSLESIRSVLARNKVCLVDVQPEALKILRTSEFKPYVIFVKPRIPEIRRHRSSPTSPERGDNGH 526

  Fly  1954 PFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQWVHN 2015
             ..||:|.|:..:|..||.::|||.|.::|..|:..|..:|...:..|||||||||..||.:
Zfish   527 -ITEEDLLDMKHSAEQMEQQYGHLVDRVLIKEDSASACVELRLILERLEREPQWVPVSWVRS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 9/48 (19%)
PDZ_signaling 1562..1640 CDD:238492 36/79 (46%)
SH3_MPP5 1673..1734 CDD:212969 32/60 (53%)
Guanylate_kin 1820..1994 CDD:279019 77/181 (43%)
GuKc 1831..2002 CDD:214504 73/178 (41%)
mpp3bXP_001340190.2 L27 11..55 CDD:280918 7/43 (16%)
L27 69..119 CDD:280918 11/59 (19%)
PDZ_signaling 135..215 CDD:238492 36/79 (46%)
SH3 230..291 CDD:302595 32/61 (52%)
Guanylate_kin 383..571 CDD:279019 79/188 (42%)
GuKc 400..571 CDD:214504 72/171 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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