DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and MPP1

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_002427.1 Gene:MPP1 / 4354 HGNCID:7219 Length:466 Species:Homo sapiens


Alignment Length:494 Identity:148/494 - (29%)
Similarity:245/494 - (49%) Gaps:63/494 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1526 SPPPVPMPPLATMPMSMPVN-LPMSACFGTLNDQN-DNIRIIQIEKST-EPLGATVR-NEGEAVV 1586
            |.|.....||.|:...|..| .|.......:..|. ..:|:||.||.| ||:|.|:: ||.::..
Human    31 SRPEAVSHPLNTVTEDMYTNGSPAPGSPAQVKGQEVRKVRLIQFEKVTEEPMGITLKLNEKQSCT 95

  Fly  1587 IGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVM 1651
            :.||:.||...:.|.||.||||||:||..:...:|:::...:...:|.::..::|          
Human    96 VARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIP---------- 150

  Fly  1652 GGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQA 1716
              ...|:|..|        .:.:||.|||||:.|..|||:|.|:.|..||::.:|:::|.||||.
Human   151 --NQQSRLPAL--------QMFMRAQFDYDPKKDNLIPCKEAGLKFATGDIIQIINKDDSNWWQG 205

  Fly  1717 YREGEEDQTLAGLIPSQSFQHQRETMKLAIAEEAGLARSRGKDGSGSKGATLLCARKGRKKKKKA 1781
            ..||...:: ||||||...|..|         .|.:|:|...:...       |:..|:|||.|.
Human   206 RVEGSSKES-AGLIPSPELQEWR---------VASMAQSAPSEAPS-------CSPFGKKKKYKD 253

  Fly  1782 SSEAGYPLYATTAPDETDPEEILTYEEVALYYPRATHKRPIVLIGPPNIGRHELRQRLMADS-ER 1845
            .       |........|..::::|||| :..| |..::.:||||...:||..::..|::.: |:
Human   254 K-------YLAKHSSIFDQLDVVSYEEV-VRLP-AFKRKTLVLIGASGVGRSHIKNALLSQNPEK 309

  Fly  1846 FSAAVPHTSRARREGEVPGVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGK 1910
            |...||:|:|..|:.|..|.:||||:.:....:|.|..|:|.|.|:...:||..|.:..:....|
Human   310 FVYPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISANEFLEFGSYQGNMFGTKFETVHQIHKQNK 374

  Fly  1911 ICVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKLRQKKLRNGEPFKEEELKDIIATARDMEARWG 1975
            |.:|::.||:||::|.::|.|::|.:||            ..:..:.|.|:.:...:..:.:::.
Human   375 IAILDIEPQTLKIVRTAELSPFIVFIAP------------TDQGTQTEALQQLQKDSEAIRSQYA 427

  Fly  1976 HLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQWVH 2014
            |.||:.::||..:....:|....:.....|||||..||:
Human   428 HYFDLSLVNNGVDETLKKLQEAFDQACSSPQWVPVSWVY 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425
PDZ_signaling 1562..1640 CDD:238492 29/79 (37%)
SH3_MPP5 1673..1734 CDD:212969 30/60 (50%)
Guanylate_kin 1820..1994 CDD:279019 49/174 (28%)
GuKc 1831..2002 CDD:214504 46/171 (27%)
MPP1NP_002427.1 PDZ 71..149 CDD:366185 28/77 (36%)
SH3_MPP1 162..223 CDD:213013 30/61 (49%)
Interaction with PALS1. /evidence=ECO:0000269|PubMed:17584769 268..466 62/211 (29%)
Guanylate_kin 281..453 CDD:366206 50/183 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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