DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and magu-2

DIOPT Version :10

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_001355433.1 Gene:magu-2 / 3565703 WormBaseID:WBGene00006467 Length:830 Species:Caenorhabditis elegans


Alignment Length:976 Identity:286/976 - (29%)
Similarity:446/976 - (45%) Gaps:230/976 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1114 VDVPDSFIEMVKTTPRYPPPAHLSSRGSLLSNGSASTAHTTLSSMGVAPS------PVTATAAAA 1172
            |.:|.:..::.:|:.|     .|||...:.:..:..:..|.||...:...      .:..|||..
 Worm     5 VSIPQALSDLKRTSLR-----RLSSARGVGNKKTVVSTSTPLSGFVILVEREEKVVRLYGTAAER 64

  Fly  1173 ASASAACATTAVAAAAVSGVADGDA--------RRVADELNGNAKPVPPPRDHLRVEKDGRLVNC 1229
            |..|.......|....:.|.:..:.        ||...:|....:.:..|     .|.:..:.||
 Worm    65 AGLSIGDEIVGVNDMKIEGKSYEEVTTYIQECIRRKIIQLKVRRRALEIP-----AENEASVFNC 124

  Fly  1230 SPAPQLPDRRAPGNASSGSSGATTHPLQHQQIAQIVEPTLEQLDSIKKYQEQ------------- 1281
            :            |::...:.|....:....|.::.:...::...|..|..:             
 Worm   125 T------------NSNRMITDAYLVSVDKDHIKEVTKRLKKEYPEIHTYDMEYIAATSGPPSVAP 177

  Fly  1282 ---------------LRR-----RREEEERIAQQNEFLRNSLRGSRKLKALQDTATP-------- 1318
                           |||     ..:|::|..|:|.|||:|||.|:||:||.....|        
 Worm   178 RGSVHTNGFGIERGSLRRPPEQFEMQEKKRKEQENTFLRSSLRKSKKLQALARNVDPLTNEPMKV 242

  Fly  1319 ---GKAVAQQQQQATLATQ------VVG---VENEAYLPDEDQPQAEQIDGYGELIAALTRLQNQ 1371
               ...:|:.::..:..|:      .||   :|:...|.||:...:.|:|   |:|.::.|:   
 Worm   243 TSFANPLAEVEETPSRKTENGATRITVGEEVLESSEVLIDEENKDSRQLD---EVIISVERI--- 301

  Fly  1372 LSKSGLSTLAGRVSAAHSVLASASVAHVLAARTAVLQRRRSRVSGPLHHSSLGLQKDIVELLTQS 1436
              .|.||::.||.|                 ..|:|   |...:.|      .:|..|.:.:.|:
 Worm   302 --ASKLSSMQGRES-----------------DVAML---RDFFAAP------PIQAAIEQTVKQN 338

  Fly  1437 NTAAAIELGNLLTSHEMEGLLLAHDRIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLG 1501
            ........|                      .||.|         |..:.|..|||:        
 Worm   339 GKCGTTSSG----------------------IGTDS---------GGDSSSCTSSPI-------- 364

  Fly  1502 MVVPPPVVPPPLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQ 1566
                     ||:...|     .|:|.   ..|..::.....|.|.|             |:::::
 Worm   365 ---------PPVIMNG-----NGKSE---RCPSTSSSSSVSPRNAP-------------NVKVVE 399

  Fly  1567 IEKSTEP-LGATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGA 1630
            :.|..:. ||||||||...:::||:|:||..||..|..||||:||:||..|:||.|||:|.:|..
 Worm   400 VVKDEDSYLGATVRNENNKIIVGRVVKGGIVEKMNLFQEGDELLELNGSSLKGKQVNEICDILRN 464

  Fly  1631 MQGTLTFLIVPAGSPPSVGVMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGI 1695
            :.|.:||::.|.....:.......|.:..|.....|    |.|:||.||||||||:|:||:||.:
 Worm   465 LSGPITFVVAPKEEQDTEQPTDTATNTVTAKKSQQH----VQHLRALFDYDPEDDVYVPCKELAM 525

  Fly  1696 SFQKGDVLHVISREDPNWWQAYREGEEDQ-TLAGLIPSQSFQHQRETMKLAIAEEAGLARSRGKD 1759
            .||:||:|||::.:|.|||||||:||:.| :|||||||.||:.|    .:..|:|  :.|.:.:.
 Worm   526 KFQRGDILHVLNTKDDNWWQAYRDGEDIQHSLAGLIPSSSFRQQ----VVLYADE--VEREQEQK 584

  Fly  1760 GSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDP-----EEILTYEEVALYYPRATHK 1819
            ....||          |||||...:.|       |.:|..|     .:.||||||.|..|:|||:
 Worm   585 RKECKG----------KKKKKLEVKKG-------ADEENLPAIGVYSDFLTYEEVVLELPKATHR 632

  Fly  1820 RPIVLIGPPNIGRHELRQRLMADSERFSAA--VPHTSRARREGEVPGVDYHFITRQAFEADILAR 1882
            |||||.|...:|..:||.||: :|:|.:.|  ||:|||..:|||..||.|||:::|.|..|..:.
 Worm   633 RPIVLCGAEGVGCLKLRDRLL-ESDRITLACPVPYTSRTPKEGEFNGVHYHFVSKQKFHEDAKSG 696

  Fly  1883 RFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKL-RQ 1946
            :|||.|||:|.:|||:.:.:..|:..||.||:.|..:||..:|:.|::||::.:|.|||..| ||
 Worm   697 KFVEFGEYQKFWYGTAKKDVVNVIERGKTCVMTLKAESLGAIRSPDIQPYIIFIAAPSLYILRRQ 761

  Fly  1947 KKLRNGEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQ 2011
            :::......|::|||.|:..::.:|.::|||||.||:|.|.|:::.:|...:..:..||.||||.
 Worm   762 REVEGTFGVKDDELKAILTQSKSIEQKYGHLFDGIIVNIDFEKSFRELKQILMKVNTEPMWVPAT 826

  Fly  2012 W 2012
            |
 Worm   827 W 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ <54..100 CDD:214570
PDZ_MPP5-like 1563..1641 CDD:467259 36/78 (46%)
SH3_MPP5 1673..1734 CDD:212969 41/61 (67%)
GuKc 1831..2002 CDD:214504 70/173 (40%)
magu-2NP_001355433.1 PDZ <59..109 CDD:214570 10/49 (20%)
PDZ_MPP5-like 406..475 CDD:467259 35/68 (51%)
SH3_MPP5 503..565 CDD:212969 41/61 (67%)
GuKc 642..817 CDD:214504 70/175 (40%)
Blue background indicates that the domain is not in the aligned region.

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