DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and magu-2

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_001355433.1 Gene:magu-2 / 3565703 WormBaseID:WBGene00006467 Length:830 Species:Caenorhabditis elegans


Alignment Length:976 Identity:286/976 - (29%)
Similarity:446/976 - (45%) Gaps:230/976 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1114 VDVPDSFIEMVKTTPRYPPPAHLSSRGSLLSNGSASTAHTTLSSMGVAPS------PVTATAAAA 1172
            |.:|.:..::.:|:.|     .|||...:.:..:..:..|.||...:...      .:..|||..
 Worm     5 VSIPQALSDLKRTSLR-----RLSSARGVGNKKTVVSTSTPLSGFVILVEREEKVVRLYGTAAER 64

  Fly  1173 ASASAACATTAVAAAAVSGVADGDA--------RRVADELNGNAKPVPPPRDHLRVEKDGRLVNC 1229
            |..|.......|....:.|.:..:.        ||...:|....:.:..|     .|.:..:.||
 Worm    65 AGLSIGDEIVGVNDMKIEGKSYEEVTTYIQECIRRKIIQLKVRRRALEIP-----AENEASVFNC 124

  Fly  1230 SPAPQLPDRRAPGNASSGSSGATTHPLQHQQIAQIVEPTLEQLDSIKKYQEQ------------- 1281
            :            |::...:.|....:....|.::.:...::...|..|..:             
 Worm   125 T------------NSNRMITDAYLVSVDKDHIKEVTKRLKKEYPEIHTYDMEYIAATSGPPSVAP 177

  Fly  1282 ---------------LRR-----RREEEERIAQQNEFLRNSLRGSRKLKALQDTATP-------- 1318
                           |||     ..:|::|..|:|.|||:|||.|:||:||.....|        
 Worm   178 RGSVHTNGFGIERGSLRRPPEQFEMQEKKRKEQENTFLRSSLRKSKKLQALARNVDPLTNEPMKV 242

  Fly  1319 ---GKAVAQQQQQATLATQ------VVG---VENEAYLPDEDQPQAEQIDGYGELIAALTRLQNQ 1371
               ...:|:.::..:..|:      .||   :|:...|.||:...:.|:|   |:|.::.|:   
 Worm   243 TSFANPLAEVEETPSRKTENGATRITVGEEVLESSEVLIDEENKDSRQLD---EVIISVERI--- 301

  Fly  1372 LSKSGLSTLAGRVSAAHSVLASASVAHVLAARTAVLQRRRSRVSGPLHHSSLGLQKDIVELLTQS 1436
              .|.||::.||.|                 ..|:|   |...:.|      .:|..|.:.:.|:
 Worm   302 --ASKLSSMQGRES-----------------DVAML---RDFFAAP------PIQAAIEQTVKQN 338

  Fly  1437 NTAAAIELGNLLTSHEMEGLLLAHDRIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLG 1501
            ........|                      .||.|         |..:.|..|||:        
 Worm   339 GKCGTTSSG----------------------IGTDS---------GGDSSSCTSSPI-------- 364

  Fly  1502 MVVPPPVVPPPLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQ 1566
                     ||:...|     .|:|.   ..|..::.....|.|.|             |:::::
 Worm   365 ---------PPVIMNG-----NGKSE---RCPSTSSSSSVSPRNAP-------------NVKVVE 399

  Fly  1567 IEKSTEP-LGATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGA 1630
            :.|..:. ||||||||...:::||:|:||..||..|..||||:||:||..|:||.|||:|.:|..
 Worm   400 VVKDEDSYLGATVRNENNKIIVGRVVKGGIVEKMNLFQEGDELLELNGSSLKGKQVNEICDILRN 464

  Fly  1631 MQGTLTFLIVPAGSPPSVGVMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGI 1695
            :.|.:||::.|.....:.......|.:..|.....|    |.|:||.||||||||:|:||:||.:
 Worm   465 LSGPITFVVAPKEEQDTEQPTDTATNTVTAKKSQQH----VQHLRALFDYDPEDDVYVPCKELAM 525

  Fly  1696 SFQKGDVLHVISREDPNWWQAYREGEEDQ-TLAGLIPSQSFQHQRETMKLAIAEEAGLARSRGKD 1759
            .||:||:|||::.:|.|||||||:||:.| :|||||||.||:.|    .:..|:|  :.|.:.:.
 Worm   526 KFQRGDILHVLNTKDDNWWQAYRDGEDIQHSLAGLIPSSSFRQQ----VVLYADE--VEREQEQK 584

  Fly  1760 GSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDP-----EEILTYEEVALYYPRATHK 1819
            ....||          |||||...:.|       |.:|..|     .:.||||||.|..|:|||:
 Worm   585 RKECKG----------KKKKKLEVKKG-------ADEENLPAIGVYSDFLTYEEVVLELPKATHR 632

  Fly  1820 RPIVLIGPPNIGRHELRQRLMADSERFSAA--VPHTSRARREGEVPGVDYHFITRQAFEADILAR 1882
            |||||.|...:|..:||.||: :|:|.:.|  ||:|||..:|||..||.|||:::|.|..|..:.
 Worm   633 RPIVLCGAEGVGCLKLRDRLL-ESDRITLACPVPYTSRTPKEGEFNGVHYHFVSKQKFHEDAKSG 696

  Fly  1883 RFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKL-RQ 1946
            :|||.|||:|.:|||:.:.:..|:..||.||:.|..:||..:|:.|::||::.:|.|||..| ||
 Worm   697 KFVEFGEYQKFWYGTAKKDVVNVIERGKTCVMTLKAESLGAIRSPDIQPYIIFIAAPSLYILRRQ 761

  Fly  1947 KKLRNGEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQ 2011
            :::......|::|||.|:..::.:|.::|||||.||:|.|.|:::.:|...:..:..||.||||.
 Worm   762 REVEGTFGVKDDELKAILTQSKSIEQKYGHLFDGIIVNIDFEKSFRELKQILMKVNTEPMWVPAT 826

  Fly  2012 W 2012
            |
 Worm   827 W 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 4/42 (10%)
PDZ_signaling 1562..1640 CDD:238492 36/78 (46%)
SH3_MPP5 1673..1734 CDD:212969 41/61 (67%)
Guanylate_kin 1820..1994 CDD:279019 75/176 (43%)
GuKc 1831..2002 CDD:214504 70/173 (40%)
magu-2NP_001355433.1 PDZ <59..107 CDD:238080 10/47 (21%)
PDZ_signaling 408..474 CDD:238492 35/65 (54%)
SH3_MPP5 503..565 CDD:212969 41/61 (67%)
GuKc 642..817 CDD:214504 70/175 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161934
Domainoid 1 1.000 150 1.000 Domainoid score I2697
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 466 1.000 Inparanoid score I852
Isobase 1 0.950 - 0 Normalized mean entropy S2106
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 1 1.000 - - otm14545
orthoMCL 1 0.900 - - OOG6_107065
Panther 1 1.100 - - LDO PTHR23122
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4595
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.700

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