DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and mpp1

DIOPT Version :10

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_999857.2 Gene:mpp1 / 325542 ZFINID:ZDB-GENE-031113-4 Length:468 Species:Danio rerio


Alignment Length:469 Identity:145/469 - (30%)
Similarity:238/469 - (50%) Gaps:68/469 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1553 GTLNDQN-DNIRIIQIEKS-TEPLGATVR-NEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQ 1614
            |.:|.:: ..:|.:..||: :||||.|:: ||.:...:.||:.||...:.|.|||||||.|:||:
Zfish    61 GHMNGRDATRMREVAFEKNPSEPLGVTLKLNEKQRCTVARILHGGMIHRQGSLHEGDEIAEINGK 125

  Fly  1615 ELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGGTTGSQLAGLGGAHRDTAVLHVRAHFD 1679
            .:..::|:::..:|....|.:|..|:              :..|...:      ...:::||.||
Zfish   126 SVSNQSVDQLQKILKDTNGVVTLKII--------------SNQQSRPM------ACEMYMRAQFD 170

  Fly  1680 YDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQAYREGEEDQT---LAGLIPSQSFQHQRET 1741
            |||..|..|||:|.|:.||.||::|:|:::||||||    |:.|.:   .||||||...|..|..
Zfish   171 YDPAKDELIPCKEAGLKFQTGDIIHIINKKDPNWWQ----GKVDSSSTDFAGLIPSPELQEWRVA 231

  Fly  1742 MKLAIAEEAGLARSRGKDGSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTY 1806
            .|.....|||.:                |:..|:|||.|..       |........|..::::|
Zfish   232 SKSKATREAGQS----------------CSPFGKKKKCKDK-------YLAKHSSIFDQLDVISY 273

  Fly  1807 EEVALYYPRATHKRPIVLIGPPNIGRHELRQRLMAD-SERFSAAVPHTSRARREGEVPGVDYHFI 1870
            ||| :..| |.:::.:||||...:||..::..|::. .|:|:...|||:|.:::.|..|.:|:||
Zfish   274 EEV-VRLP-AFNRKTLVLIGAHGVGRSLIKNSLLSKYPEKFAYPAPHTTRPQKKDEENGKEYYFI 336

  Fly  1871 TRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVL 1935
            :.......|:....:|:|.|:...:||.:|.|..:...|||.||::.||:||:||.::..|.|:.
Zfish   337 SNDEMTKGIVGNELLEYGSYQGHMFGTKIETIHKIHEQGKIAVLDVEPQTLKVLRTAEFAPLVIF 401

  Fly  1936 VAPPSLDKLRQKKLRNGEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINS 2000
            :||.:...            :.|.:::|...:..:.|...|.||.|::|||.:.:...:...|..
Zfish   402 IAPTNTGN------------QSEAVQNIQKESDSLLAAHRHFFDEILVNNDVDESVKGVEDAIER 454

  Fly  2001 LEREPQWVPAQWVH 2014
            ....|||||..||:
Zfish   455 ASSSPQWVPISWVY 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ <54..100 CDD:214570
PDZ_MPP5-like 1563..1641 CDD:467259 30/79 (38%)
SH3_MPP5 1673..1734 CDD:212969 33/63 (52%)
GuKc 1831..2002 CDD:214504 48/171 (28%)
mpp1NP_999857.2 PDZ_MPP1-like 72..152 CDD:467266 30/93 (32%)
SH3_MPP1 164..225 CDD:213013 33/64 (52%)
Guanylate_kin 284..453 CDD:395500 51/180 (28%)
Blue background indicates that the domain is not in the aligned region.

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