DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and dlg1

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_001162718.1 Gene:dlg1 / 32083 FlyBaseID:FBgn0001624 Length:1030 Species:Drosophila melanogaster


Alignment Length:1073 Identity:200/1073 - (18%)
Similarity:342/1073 - (31%) Gaps:355/1073 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1029 SSNSNSNSLNSSNSSMHTSSSSSGHSSNIASATSSSSATSSSTVPDDLSLAPPGYEVSQQQQQQH 1093
            ||:.|...|:|.:.:.|....         .|..||.|.......::..|.|......:..|.| 
  Fly    12 SSDPNEGLLSSDDKTFHDDDE---------PAEDSSPADDEEEPEEEECLLPQKKAQIRCDQDQ- 66

  Fly  1094 LVATPVTMLLPPMAKHREL--------PVDVP--------DSFIEMVK------TTPRYPPP--- 1133
               .|:.:|:.|.|:..|:        ||.|.        ||.:|:::      |.|...||   
  Fly    67 ---PPLVVLVQPSAEAIEVRQEIDDTNPVAVAAKASDMDGDSQLEVMEHQMETVTEPDPEPPKCP 128

  Fly  1134 -----------------------AHLSSRGSLLSNGSASTAHTTLSSMGVAPSPVTATAAAAASA 1175
                                   .|:.|..|::......:.:...|....:.......:::::.|
  Fly   129 TSLRDSVRESVECFYSAQDLLEYGHMLSSTSMVRTPDVESGYFEKSESDASRDEWEGPSSSSSGA 193

  Fly  1176 SAACATTAVAAAAVSGVADGDARRVADELN--------------------------GNAKPVPPP 1214
            :.....:.::..:||..:...|..:..||:                          ..|||.|..
  Fly   194 ARCRLLSGISGLSVSSSSRHSAEGLRMELSRFRTMIETLERESLEKSQSELQLKAKSKAKPKPKQ 258

  Fly  1215 RDHLRVEKDGRLVNCSPAPQLPDRRAPGNASS-------------GSSGATTHPLQHQQIAQIVE 1266
            |.|:                   :.|.|.:.|             |.:|......:.::||.| :
  Fly   259 RSHV-------------------QDAAGESGSEQGSERGFWSTIFGQAGLAISQDEEERIADI-Q 303

  Fly  1267 PTLEQLDSIKKYQEQLRRRREEEERIAQQ-----------------NEFLRNSL----------- 1303
            .....|:.::.|..:|...::...|||.:                 .||...:|           
  Fly   304 KAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSKSIQQKT 368

  Fly  1304 -------------------RGSRKLKALQDTATPGKAVAQQQQQATLATQVVGVENEAYLPDEDQ 1349
                               ..:::::...||....:...:|||:...|.|     ..:..|.:..
  Fly   369 AETLQIATKWEKDGQAVKIADNQRMRIESDTENAKEPTVEQQQKQQQAQQ-----RSSRSPQQQN 428

  Fly  1350 PQAEQ---------------------------IDGYGELIAALTRLQN----------QLSKSGL 1377
            ||.:|                           ..|.|..||..|...:          :|...|.
  Fly   429 PQQQQGSKSRSGSQTVNGDDSWLYEDIQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGA 493

  Fly  1378 STLAGRVSAAHSVLASAS------VAHVLA------ARTAV---LQRRRSRVSGPLHHSSLGLQK 1427
            :...||:| .:.::.|.:      |.|..|      |...|   ::|:|...:.|...|:.|..:
  Fly   494 AAADGRLS-INDIIVSVNDVSVVDVPHASAVDALKKAGNVVKLHVKRKRGTATTPAAGSAAGDAR 557

  Fly  1428 D-------IVEL-LTQSNTAAAIEL-GNLLTSH------------------EMEGLLLAHDR-IA 1464
            |       ::|: |.:........: |.:...|                  :::|.|...|: ||
  Fly   558 DSAASGPKVIEIDLVKGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLSIGDKLIA 622

  Fly  1465 NHTDGTPSPTPTPTPAIGAATGSTLSSPVA---GPKRNL----------------------GMVV 1504
            ..|:|:.......|..:..||..:::..|.   |..::|                      ..:.
  Fly   623 VRTNGSEKNLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLA 687

  Fly  1505 PPPVVPPPLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEK 1569
            ..........|:.|.|:...:|..|........:..::|...|.:.   :..|.....|.|.|:|
  Fly   688 TSQSQSQVHQQQHATPMVNSQSTEPGSRYASTNVLAAVPPGTPRAV---STEDITREPRTITIQK 749

  Fly  1570 STEPLGATV--RNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQ 1632
            ..:.||..:  ..:|:.:.:..|:.||.|:....|..||::|.||...|...|..|....|....
  Fly   750 GPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQALKTSG 814

  Fly  1633 GTLTFLIVPAGSPPS--------VGVMGGTTGSQLAGLGGAHRDTAV-------LHVRAHFDYDP 1682
            |.:|.|   |...|.        :..:     .|.|.||.....|.:       |:|||.|||||
  Fly   815 GVVTLL---AQYRPEEYNRFEARIQEL-----KQQAALGAGGSGTLLRTTQKRSLYVRALFDYDP 871

  Fly  1683 EDDLYIPCRELGISFQKGDVLHVISREDPNWWQAYRE-GEEDQTLAGLIPSQ------------- 1733
            ..|..:|.|  |:.|:.||:|||.:..|..||||.|. |:.:....|::||:             
  Fly   872 NRDDGLPSR--GLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRS 934

  Fly  1734 -SFQ-H-------------QRETMKLAIAEEAGLARSR---GKDGSGSKGATLLCARKGRKKKKK 1780
             .|| |             .|:......:.:....:||   .:|||..: ..:||     ..:..
  Fly   935 VKFQGHAAANNNLDKQSTLDRKKKNFTFSRKFPFMKSRDEKNEDGSDQE-PFMLC-----YTQDD 993

  Fly  1781 ASSEAGYPLYATTAPDETDPEEILTYEEVALYY 1813
            |::|.|..:|....||         .|::.|.|
  Fly   994 ANAEGGEIIYRVELPD---------MEQITLIY 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 11/70 (16%)
PDZ_signaling 1562..1640 CDD:238492 24/79 (30%)
SH3_MPP5 1673..1734 CDD:212969 28/75 (37%)
Guanylate_kin 1820..1994 CDD:279019
GuKc 1831..2002 CDD:214504
dlg1NP_001162718.1 L27_1 303..359 CDD:286187 9/55 (16%)
PDZ 454..540 CDD:214570 16/86 (19%)
PDZ_signaling 566..655 CDD:238492 15/88 (17%)
PDZ_signaling 742..820 CDD:238492 23/77 (30%)
SH3_DLG-like 862..922 CDD:212795 28/61 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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