DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and Dlg4

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_062567.1 Gene:Dlg4 / 29495 RGDID:68424 Length:724 Species:Rattus norvegicus


Alignment Length:851 Identity:206/851 - (24%)
Similarity:324/851 - (38%) Gaps:240/851 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1253 THPLQHQQIAQIVE-----PTLEQLDSIKK--YQEQLR----RRREEEERIAQQNEFLRNSLRGS 1306
            |.||:|.. |.:..     |.:...|:::.  |:.|:.    ....||..:.:.|..|..|:.|.
  Rat    19 TPPLEHSP-AHLPNQANSPPVIVNTDTLEAPGYELQVNGTEGEMEYEEITLERGNSGLGFSIAGG 82

  Fly  1307 RKLKALQDTAT-------PGKAVAQQ---------------------QQQATLATQVVGVENEAY 1343
            .....:.|..:       ||.|.||.                     ...|..|.:..|.....|
  Rat    83 TDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLY 147

  Fly  1344 LPDEDQPQAEQI---------DGYGELIAALTRLQN----------QLSKSGLSTLAGRVSAAHS 1389
            :. ..:|.||::         .|.|..||.....|:          ::.:.|.:...||:.....
  Rat   148 VM-RRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDK 211

  Fly  1390 VLASASVAHVLAARTAVLQRRRSRVSGPLHHSSLGLQK---DIVELLTQSNTAAAIELG----NL 1447
            :||..||.                :...:|..::...|   |:|.|.....:.|.:...    ::
  Rat   212 ILAVNSVG----------------LEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDI 260

  Fly  1448 LTSHEMEGLLLAH-DRIANHTD--GTPSPTP-TPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPV 1508
            .||:..      | |...:|:.  ||..||. |||                .|:|.      .||
  Rat   261 TTSYSQ------HLDNEISHSSYLGTDYPTAMTPT----------------SPRRY------SPV 297

  Fly  1509 VPPPLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKSTEP 1573
            ....|.:.            .:|..|                            |.|.|.:.:..
  Rat   298 AKDLLGEE------------DIPREP----------------------------RRIVIHRGSTG 322

  Fly  1574 LGATV--RNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVC-ALLGAMQGTL 1635
            ||..:  ..:||.:.|..|:.||.|:.||.|.:||:||.|||.:||..:..:.. ||..|.|   
  Rat   323 LGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ--- 384

  Fly  1636 TFLIVPAGSPPSVG------------VMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYI 1688
            |..|:....|....            :|..:.||..|.|  ........::||.||||...|   
  Rat   385 TVTIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASL--RSNPKRGFYIRALFDYDKTKD--- 444

  Fly  1689 PCREL--GISFQKGDVLHVISREDPNWWQAYREGEEDQT-LAGLIPSQSFQHQRETMKLAIAEEA 1750
             |..|  .:||:.|||||||...|..||||.|...:.:| ..|.|||:....:||..:|      
  Rat   445 -CGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRL------ 502

  Fly  1751 GLARSRGKDGSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVA---LY 1812
                 :.||...|.|:      :||:                        :.:|:||.|.   ::
  Rat   503 -----KAKDWGSSSGS------QGRE------------------------DSVLSYETVTQMEVH 532

  Fly  1813 YPRATHKRPIVLIGPPNIGRHELRQRLMAD-SERFSAAVPHTSRARREGEVPGVDYHFI-TRQAF 1875
            |     .|||:::||.   :......|::: .::|.:.||||:|.:||.|:.|.||||: :|:..
  Rat   533 Y-----ARPIIILGPT---KDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKM 589

  Fly  1876 EADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPS 1940
            |.||.|.:|:|.|:|....||||::::|.|...||.|:|::...:::.|:|:.|.|..:.:.|.|
  Rat   590 EKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRS 654

  Fly  1941 LDKLRQKKLRNGEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREP 2005
            |:.:    |...:...||:.:.....|..:|..:...|..|:..:..|..||::...|..|....
  Rat   655 LENV----LEINKRITEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIEDLSGPY 715

  Fly  2006 QWVPAQ 2011
            .||||:
  Rat   716 IWVPAR 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 9/50 (18%)
PDZ_signaling 1562..1640 CDD:238492 29/80 (36%)
SH3_MPP5 1673..1734 CDD:212969 29/63 (46%)
Guanylate_kin 1820..1994 CDD:279019 56/175 (32%)
GuKc 1831..2002 CDD:214504 52/172 (30%)
Dlg4NP_062567.1 MAGUK_N_PEST 10..64 CDD:287565 9/45 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..35 5/16 (31%)
PDZ 65..149 CDD:278991 15/83 (18%)
PDZ 160..244 CDD:278991 17/99 (17%)
PDZ_assoc 245..312 CDD:287558 20/134 (15%)
PDZ 310..394 CDD:214570 31/114 (27%)
SH3_DLG4 430..495 CDD:212963 29/68 (43%)
Guanylate_kin 533..711 CDD:279019 58/189 (31%)
GuKc 544..710 CDD:214504 52/169 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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