DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and Mpp4

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_001158154.1 Gene:Mpp4 / 227157 MGIID:2386681 Length:654 Species:Mus musculus


Alignment Length:739 Identity:209/739 - (28%)
Similarity:341/739 - (46%) Gaps:184/739 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1342 AYLPDEDQPQAEQIDGYGELIAALTRLQNQLS------KSGLSTLAGRVSAAHSVLASASVAHVL 1400
            |.|.:||:......|....|...|..|..:||      .:||..|       :.:|.|..:..:|
Mouse    27 AELTNEDRALPTPPDPENGLSGILRLLLQELSLFYSRDVNGLCLL-------YDLLHSPWLQALL 84

  Fly  1401 AARTAVLQRRRSRVSGPLHHSSLGLQKDIVELLTQSNTAAAI-ELGNLLTSHEMEGLLLAHDRIA 1464
            .....:.:.:..::.....|:.: |..:::|||.:::.:..| ||..:|.:...:.||.|||.: 
Mouse    85 KVYDCLQRFKEKKLVPDTTHAQI-LACEVLELLPKASGSPEIQELRQVLQAPHCKALLSAHDTV- 147

  Fly  1465 NHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPPPLAQRGAMPLPRGESPPP 1529
                                                             ||:...||        
Mouse   148 -------------------------------------------------AQKDFEPL-------- 155

  Fly  1530 VPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKSTEPLGATVRNE---GEAVVIGRIV 1591
              :|||       |.|:|         |..:.:||:.:.|:.:|||||::..   |: :::.|::
Mouse   156 --LPPL-------PDNIP---------DSEEAMRIVCLVKNQQPLGATIKRHEITGD-ILVARVI 201

  Fly  1592 RGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGGTTG 1656
            .||..|:||||:.||:::||||..:.|....:|..:|....||:.|.::|..:||        ..
Mouse   202 HGGLVERSGLLYAGDKLVEVNGVSVEGLDPEQVIHILAMSCGTIMFKVIPVSAPP--------VS 258

  Fly  1657 SQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQAYREGE 1721
            ||           .:::|||..||.|::|..|||.:.|:.|.|||:|.::.:.|..||||.:  .
Mouse   259 SQ-----------KMVYVRAMIDYWPQEDPDIPCMDAGLPFLKGDILQIVDQNDALWWQARK--I 310

  Fly  1722 EDQTL-AGLIPSQSF--QHQRE---------------TMKLAIAEEAG----------------- 1751
            .|.|: ||||||...  :.|||               |..|::.||..                 
Mouse   311 SDLTICAGLIPSNHLLKRKQREFWWSQPYQPHTCLKSTRALSMEEEDSMKIDEKCVEADEETFES 375

  Fly  1752 --LARSRGK---DG-----SGSKGATLLCARKGRKKKKKASSEAGYPLY-ATTAPDETDPEEILT 1805
              ||.::.:   ||     :|.:.:..||.||....:..||.......| |..||          
Mouse   376 EELAEAKDEFVGDGQKFFIAGFRRSMRLCRRKSHFSQLHASLCCSCSCYSAVGAP---------- 430

  Fly  1806 YEEVALYYPRATHK-RPIVLIGPPNIGRHELRQRLM-ADSERFSAAVPHTSRARREGEVPGVDYH 1868
            ||||..|..:...| |.|||:||..:|.:|||::|: .:...|.:|||||:|..:..|:.|.:||
Mouse   431 YEEVVRYQRQPADKHRLIVLVGPSGVGVNELRRQLIGCNPSCFQSAVPHTTRFPKSYEMDGREYH 495

  Fly  1869 FITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYV 1933
            :::|:.||:.:...:.:|:|||:...||||:.|:..|:..||||:::|.||.::..|..||||||
Mouse   496 YVSRETFESLMYGHKMLEYGEYKGHLYGTSVNAVHAVLDEGKICIMDLEPQDIQSARTRDLKPYV 560

  Fly  1934 VLVAPPSLDKLRQKKLRNGE---------PFKEEELKDIIATARDMEARWGHLFDMIIINNDTER 1989
            :.:.||:...:|..: :|.:         .||:|:|:::...|:.||:::|..||.:|:|::.:.
Mouse   561 IFIKPPNTSSMRHSR-KNAKITTDYYVDMKFKDEDLQEMEELAQKMESQFGQFFDHVIVNDNLQD 624

  Fly  1990 AYHQLLAEINSLEREPQWVPAQWV 2013
            |..|||:.|...:.|.||||..||
Mouse   625 ACGQLLSAIQKAQEELQWVPEAWV 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 13/43 (30%)
PDZ_signaling 1562..1640 CDD:238492 29/80 (36%)
SH3_MPP5 1673..1734 CDD:212969 29/61 (48%)
Guanylate_kin 1820..1994 CDD:279019 66/183 (36%)
GuKc 1831..2002 CDD:214504 64/180 (36%)
Mpp4NP_001158154.1 L27 <66..100 CDD:197794 6/40 (15%)
L27 108..154 CDD:280918 15/95 (16%)
PDZ_signaling 171..250 CDD:238492 29/79 (37%)
SH3_MPP4 264..324 CDD:212967 29/61 (48%)
Guanylate_kin 446..636 CDD:279019 70/190 (37%)
GuKc 454..637 CDD:214504 64/183 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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