DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and magu-1

DIOPT Version :10

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_497201.1 Gene:magu-1 / 190302 WormBaseID:WBGene00021914 Length:567 Species:Caenorhabditis elegans


Alignment Length:542 Identity:149/542 - (27%)
Similarity:234/542 - (43%) Gaps:126/542 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1518 AMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDN--IRIIQIEKSTEPLGATVRN 1580
            |..:..|...|.:|..|...                   |::|.  ::|::|.:..||||||::.
 Worm   101 AQEISAGRFAPQLPDVPFEV-------------------DEDDGVAVKIVRIVRRGEPLGATIKC 146

  Fly  1581 EGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAM-QGTLTFLIVPAGS 1644
            |...|.:.||:..|.|::||.:.|||.:|||||..:..|...|:..||... .|.:||.::||  
 Worm   147 ERGKVYVARIMANGVADRSGCIQEGDRVLEVNGITVADKEPREIVKLLDKCDNGIITFKLIPA-- 209

  Fly  1645 PPSVGVMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISRE 1709
                     ....:|.....:||     :.||.|||||..|...||.|..|||:.||:|.::..:
 Worm   210 ---------EINQKLKQKKSSHR-----YARALFDYDPWQDKRHPCPEAAISFRGGDILEILDEK 260

  Fly  1710 DPNWWQAYR---------------EGEEDQTLAGLIPSQSFQHQRETMKLAIAEEAGLARSRGKD 1759
            |..|||..:               |..:|....||:||:..|.|.|      ..|.|:..|    
 Worm   261 DQYWWQTRKIGFGALARRKESHDDENRDDSKKVGLVPSEWLQCQSE------IPENGIDTS---- 315

  Fly  1760 GSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVALYYPRATHKRPIVL 1824
               ....:.|...|||                             .||.|..:..:...:|.:||
 Worm   316 ---DDFQSFLENHKGR-----------------------------FYESVFRWRNKKKRRRVVVL 348

  Fly  1825 IGPPNIGRHELRQ---RLMADSERFSAAVPHTSRARREGEVPGVDYHFITRQAFEADILARRFVE 1886
            :|.|.:||:|:|:   ::.||  ||:.|:|||||.:|..|..||:|:|.:|...|..|..:..:|
 Worm   349 LGAPGVGRNEIRRQFFKVFAD--RFTNAIPHTSRPQRPNESDGVNYYFTSRSEMERMIERKEMLE 411

  Fly  1887 HGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKL------- 1944
            :||:....|||:|:::|.....|.: :|..||.:::.:|..:..|.|:.|.||...:.       
 Worm   412 YGEFRDNLYGTALKSVRKASEKGTV-LLTPHPLAIENIRTWEFAPIVIFVQPPEFGEFKHTREVY 475

  Fly  1945 RQKKLRN------------------GEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAY 1991
            |.:..|:                  ...|.:.|::.||..:..||.::....|.||.|.|.:...
 Worm   476 RSQTTRSHSAASSSNISQNTAATSAARAFSDVEIRQIIDNSAQMEQKYRGYCDAIIRNVDLDTTM 540

  Fly  1992 HQLLAEINSLEREPQWVPAQWV 2013
            ::|...|..||.:..|:|.:|:
 Worm   541 NELTGLIYQLESKATWMPMKWL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ <54..100 CDD:214570
PDZ_MPP5-like 1563..1641 CDD:467259 31/78 (40%)
SH3_MPP5 1673..1734 CDD:212969 27/75 (36%)
GuKc 1831..2002 CDD:214504 56/198 (28%)
magu-1NP_497201.1 PDZ_MPP3-MPP4-MPP7-like 129..208 CDD:467260 31/78 (40%)
SH3_MPP 224..300 CDD:212796 27/75 (36%)
Guanylate_kin 348..550 CDD:395500 59/204 (29%)
Blue background indicates that the domain is not in the aligned region.

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