DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdt and Card14

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_006532429.1 Gene:Card14 / 170720 MGIID:2386258 Length:1029 Species:Mus musculus


Alignment Length:875 Identity:172/875 - (19%)
Similarity:289/875 - (33%) Gaps:306/875 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1254 HPLQHQ--------QIAQIV--------EPTLEQLDSIKKYQEQLRRRREEEERIAQ------QN 1296
            |.||.:        |.|.:|        |.:|:...:::...|:|.|.:||.|::..      :.
Mouse   220 HSLQEELYLVKQELQRASLVSSCERESRERSLKMASNLEPQGEELNRLKEENEKLRSMTFSLVEK 284

  Fly  1297 EFLRNSLRGSRKLK--------ALQDTATPGKAVAQQQQQATLATQVVGVENEAYLPDEDQPQAE 1353
            :.|..||..:|:.|        :|::     :|||.::||            :.|..:::|..  
Mouse   285 DILEQSLDEARESKQELVDRIHSLRE-----RAVAAERQQ------------KQYWEEKEQTL-- 330

  Fly  1354 QIDGYGELIAALTRLQNQLSKSGLSTLAGRVSAAHSVLASASVAHVLAARTAVLQRRR-----SR 1413
                   |....|::..:|.|..::.|.|:|                    |.||:.|     :|
Mouse   331 -------LQFRKTQVDCELYKEKMTMLQGQV--------------------AELQKERDQAYTAR 368

  Fly  1414 VSGPLHHSSLGLQKDIVELLTQSNTAAAIELGNLLTSHEMEGLLLAHDRIANHTDGTPSPTPTPT 1478
            ....:..|...::||.:.......|....||...|...:.|                        
Mouse   369 DRAQMEISQRLVEKDALRRRVFELTEQVCELRTQLRRLQAE------------------------ 409

  Fly  1479 PAIGAATGSTLSSPVAGPKRNLG-----------MVVPPPVVPP--------------------P 1512
                 |.|        |||:..|           :|....|.||                    .
Mouse   410 -----APG--------GPKQEAGARELCLRGKQRLVRMHAVCPPDDSDCSLLSSTESRLWWDLNS 461

  Fly  1513 LAQRGAMPLPRGESPPPVPMPPLATM--------------PMSMPVNLPMSACFGTLNDQNDNIR 1563
            .:.|..|...|..|    ||||....              .:|.|..|.|.....|::|.:.::.
Mouse   462 TSSREQMDSFRSSS----PMPPSQQSLYKRVAEDFLEDPESLSFPEVLEMRLQGATVDDTDTDLE 522

  Fly  1564 IIQIE-----KSTEPLGATVR--NEGEAV---------VIGRIVRGGAAEKSGLLHEGDEILE-- 1610
            ...|:     ::.:.|..:.|  |..|.:         |..|..|...::.:.|..:||.:||  
Mouse   523 FEMIDGADLSQTEDSLQGSSRSLNVSERLCLPAHSSVPVRRRPARKILSQVTVLAFQGDALLEQI 587

  Fly  1611 -VNGQELRGKTVNEVCALLGAMQ-----GTLTFLIVPAGSPPSV-GVMGGTTGSQLAGLGGAHRD 1668
             |.|..|.|..::.|.....|.:     ||...::....:.||: ..:..||..|..||......
Mouse   588 GVIGGNLTGIFIHRVTPGSAADEMALRPGTQIMMVDYKPTKPSLRATLENTTLEQAVGLLRRVNG 652

  Fly  1669 TAVLHVRAHF--------DYDPE-----DDLYIPCRELGISFQKG----------DVLHVISR-- 1708
            :..|.|:.:.        |.|.:     |..||   .:.::.|:|          |:|||...  
Mouse   653 SCYLSVKINTEGYKNLIQDLDAKVVTSGDSFYI---RVNLAMQRGGDGELQTHCNDILHVTDTMF 714

  Fly  1709 EDPNWWQAYREGE---EDQTLAGLIPSQSFQHQRE--------TMKLAIAEEAG----------- 1751
            :..:.|.|:....   :|.. .|.||:.| |.|::        |.:..:..:.|           
Mouse   715 QGRSCWHAHHVNPYTMKDME-PGTIPNYS-QAQQQLLALIQDMTQRCTVPRKVGHLVLLGHRAPF 777

  Fly  1752 -----LARSRGKDG--------SGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEI 1803
                 |:.|:...|        |..|.|.........:.:..:..|.|.|.....:      |..
Mouse   778 TLSTHLSLSKPPGGPQKLVRIVSVDKAAVSPLTSSFDQSQWDSGKEEGGPSVCFWS------ESC 836

  Fly  1804 LTYEEVALYYP-RATHKRPIVLIGPPNIGRHE-----LRQRLMADSERFSAAVPHTSRARR---- 1858
            .|.....|.:| |....||::.: |..:||..     |.|.....|..:.:...:.:.::|    
Mouse   837 FTLAPYTLVHPHRPARPRPVLFV-PRLVGRILGKKLCLLQGFKQCSAEYLSQEEYATWSQRGDII 900

  Fly  1859 -EGEVPGVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLK 1922
             |||..| |:|:|||.|.|                     ||..:.|      ..:|::...|::
Mouse   901 QEGESIG-DHHWITRHAVE---------------------SLMNMST------HALLDVRLDSVR 937

  Fly  1923 LLRASDLKPYVVLVAPPSLDKLRQKKLRNG 1952
            :|...|:.|.::.|   |:::...||||.|
Mouse   938 VLHRMDMFPIIIHV---SVNEKTAKKLRKG 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 7/42 (17%)
PDZ_signaling 1562..1640 CDD:238492 21/101 (21%)
SH3_MPP5 1673..1734 CDD:212969 18/88 (20%)
Guanylate_kin 1820..1994 CDD:279019 35/143 (24%)
GuKc 1831..2002 CDD:214504 32/132 (24%)
Card14XP_006532429.1 DD 19..104 CDD:387368
Smc <132..410 CDD:224117 47/264 (18%)
PDZ_signaling 587..659 CDD:238492 16/71 (23%)
SH3 684..745 CDD:388381 16/65 (25%)
NK <884..1008 CDD:388413 27/112 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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