DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdt and Dlg4

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_001357604.1 Gene:Dlg4 / 13385 MGIID:1277959 Length:764 Species:Mus musculus


Alignment Length:979 Identity:226/979 - (23%)
Similarity:366/979 - (37%) Gaps:292/979 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1094 LVATPVTMLLPPM--AKHREL---PVDVPDSFIEMVKTTPRY-------PP----PAHLSSRGSL 1142
            |:|.|:....||:  ..|.:|   .:|:.|.:...:..:.:|       ||    ||||.::   
Mouse    14 LLAPPLLRWAPPLLTVLHSDLFQALLDILDYYEACISESQKYRYQDEDTPPLEHSPAHLPNQ--- 75

  Fly  1143 LSNGSASTAHT-TLSSMGVAPSPVTATAAAA--ASASAACATTAVAAAAVSG-----VADGDARR 1199
             :|......:| ||.    ||..|..|....  ...:.....:.:..:...|     :.|..:..
Mouse    76 -ANSPPVIVNTDTLE----APGYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIF 135

  Fly  1200 VADELNGNAKPVPPPRDHLRVEKDGRL-VNCSP--APQLPDRRAPGNASSGSSGATTHPLQHQQI 1261
            :...:.|.|           ..:|||| ||.|.  ..::..|....:|:                
Mouse   136 ITKIIPGGA-----------AAQDGRLRVNDSILFVNEVDVREVTHSAA---------------- 173

  Fly  1262 AQIVEPTLEQLDSIKKYQEQLRRRREEEERIAQQNEFLRNSLRGSRKLKALQDTATPGKAVAQQQ 1326
               ||...|....::.|   :.||:...|:|.:              :|.::.....|.::|.  
Mouse   174 ---VEALKEAGSIVRLY---VMRRKPPAEKIIE--------------IKLIKGPKGLGFSIAG-- 216

  Fly  1327 QQATLATQVVGVENEAYLPDEDQPQAEQIDGYGELIAALTRLQNQLSKSGLSTLAGRVSAAHSVL 1391
                      ||.|: ::|.::.....:|                 .:.|.:...||:.....:|
Mouse   217 ----------GVGNQ-HIPGDNSIYVTKI-----------------IEGGAAHKDGRLQIGDKIL 253

  Fly  1392 ASASVAHVLAARTAVLQRRRSRVSGPLHHSSLGLQK---DIVELLTQSNTAAAIELG----NLLT 1449
            |..||.                :...:|..::...|   |:|.|.....:.|.:...    ::.|
Mouse   254 AVNSVG----------------LEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITT 302

  Fly  1450 SHEMEGLLLAH-DRIANHTD--GTPSPTP-TPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVP 1510
            |:..      | |...:|:.  ||..||. |||                .|:|.      .||..
Mouse   303 SYSQ------HLDNEISHSSYLGTDYPTAMTPT----------------SPRRY------SPVAK 339

  Fly  1511 PPLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKSTEPLG 1575
            ..|.:.            .:|..|                            |.|.|.:.:..||
Mouse   340 DLLGEE------------DIPREP----------------------------RRIVIHRGSTGLG 364

  Fly  1576 ATV--RNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVC-ALLGAMQGTLTF 1637
            ..:  ..:||.:.|..|:.||.|:.||.|.:||:||.|||.:||..:..:.. ||..|.|   |.
Mouse   365 FNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ---TV 426

  Fly  1638 LIVPAGSPPSVG------------VMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPC 1690
            .|:....|....            :|..:.||..|.|  ........::||.||||...|    |
Mouse   427 TIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASL--RSNPKRGFYIRALFDYDKTKD----C 485

  Fly  1691 REL--GISFQKGDVLHVISREDPNWWQAYREGEEDQT-LAGLIPSQSFQHQRETMKLAIAEEAGL 1752
            ..|  .:||..|||||||...|..||||.|...:.:| ..|.|||:....:||..:|        
Mouse   486 GFLSQALSFHFGDVLHVIDASDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRL-------- 542

  Fly  1753 ARSRGKDGSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVA---LYYP 1814
               :.||...|.|:      :||:                        :.:|:||.|.   ::| 
Mouse   543 ---KAKDWGSSSGS------QGRE------------------------DSVLSYETVTQMEVHY- 573

  Fly  1815 RATHKRPIVLIGPPNIGRHELRQRLMAD-SERFSAAVPHTSRARREGEVPGVDYHFI-TRQAFEA 1877
                .|||:::||.   :......|::: .::|.:.||||:|.:||.|:.|.||||: :|:..|.
Mouse   574 ----ARPIIILGPT---KDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEK 631

  Fly  1878 DILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPSLD 1942
            ||.|.:|:|.|:|....||||::::|.|...||.|:|::...:::.|:|:.|.|..:.:.|.||:
Mouse   632 DIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLE 696

  Fly  1943 KLRQKKLRNGEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQW 2007
            .:    |...:...||:.:.....|..:|..:...|..|:..:..|..||::...|..|.....|
Mouse   697 NV----LEINKRITEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIEDLSGPYIW 757

  Fly  2008 VPAQ 2011
            |||:
Mouse   758 VPAR 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 9/50 (18%)
PDZ_signaling 1562..1640 CDD:238492 29/80 (36%)
SH3_MPP5 1673..1734 CDD:212969 29/63 (46%)
Guanylate_kin 1820..1994 CDD:279019 56/175 (32%)
GuKc 1831..2002 CDD:214504 52/172 (30%)
Dlg4NP_001357604.1 L27 <26..47 CDD:351851 4/20 (20%)
MAGUK_N_PEST 54..104 CDD:337803 15/57 (26%)
PDZ 105..189 CDD:334167 17/116 (15%)
PDZ 197..287 CDD:214570 21/149 (14%)
PDZ_assoc 285..352 CDD:313755 20/134 (15%)
PDZ 350..434 CDD:214570 31/114 (27%)
SH3_DLG4 470..535 CDD:212963 29/68 (43%)
Guanylate_kin 573..751 CDD:279019 58/189 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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