DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdt and Dlg1

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_006521824.1 Gene:Dlg1 / 13383 MGIID:107231 Length:939 Species:Mus musculus


Alignment Length:1025 Identity:238/1025 - (23%)
Similarity:395/1025 - (38%) Gaps:246/1025 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1060 ATSSSSATSSSTVPDDLSLAPPGYEVSQQQQQQHLVATPVTMLLPPMAKHRELPVDV--PDSFIE 1122
            |:..|:|.:|.|:|..||                          ||:.|:|....:|  |:....
Mouse    85 ASLPSTAVTSETLPGSLS--------------------------PPVEKYRYQDEEVLPPEHISP 123

  Fly  1123 MVKTTPRYPPPAHLSSRG-SLLSNGSASTAHTTLSSMGVAPSPVTATAAAAASASAACATTAVAA 1186
            .|......|...|:|.:. |.:.|.....:|:.:       ||:..|.|...|:.....|.|:..
Mouse   124 QVTNEVLGPELVHVSEKNLSEIENVHGFVSHSHI-------SPIKPTEAVPPSSPIVPVTPALPV 181

  Fly  1187 AAVSGVADGDARRVADELNGNAKPVPPPRDHLRVEKDGRLVNCSPA----PQLPDRRAPGNASSG 1247
            .|.|.|....|.:      .|..||....|.|...   ..||.:.|    .::...|  ||:..|
Mouse   182 PAESTVVLPSAPQ------ANPPPVLVNTDSLETP---TYVNGTDADYEYEEITLER--GNSGLG 235

  Fly  1248 SS--GATTHPLQHQQ----IAQIVEPTLEQLDSIKKYQEQLRRRREEEERIAQQNEFLRNSLRGS 1306
            .|  |.|.:|.....    |.:|:.......|...:..:.:.|..|.:.|          .:..|
Mouse   236 FSIAGGTDNPHIGDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVR----------DVTHS 290

  Fly  1307 RKLKALQDTATPGKAVAQQQQQATLATQVVGVENEAYLPDEDQPQAEQIDGYGELIAALTRLQNQ 1371
            :.::||::..:..:...:::                      :|.:|:|            ::.:
Mouse   291 KAVEALKEAGSIVRLYVKRR----------------------KPASEKI------------MEIK 321

  Fly  1372 LSK--SGLS-TLAGRVSAAHSVLASASVAHVLAARTAVLQRRRSRVSGPLHHSSLGLQKDIVELL 1433
            |.|  .||. ::||.|...|  :...:..:|    |.:::...:...|.|         .|.:.|
Mouse   322 LIKGPKGLGFSIAGGVGNQH--IPGDNSIYV----TKIIEGGAAHKDGKL---------QIGDKL 371

  Fly  1434 TQSNTAAAIELGNLLTSHEMEGLLLAHDRIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKR 1498
            ...|:....|:     :||.     |...:.|.:|........||                    
Mouse   372 LAVNSVCLEEV-----THEE-----AVTALKNTSDFVYLKVAKPT-------------------- 406

  Fly  1499 NLGMVVPPPVVPPPLAQRGAMPLPRGESPP----PVPMPPLATMPMSMPVNLPMSACFGTLNDQN 1559
              .|.:.....||.:....:..:....||.    ..|..|....|:|..|          |.|  
Mouse   407 --SMYINDGYAPPDITNSSSQSVDNHVSPSSCLGQTPTSPARYSPISKAV----------LGD-- 457

  Fly  1560 DNI----RIIQIEKSTEPLGATV--RNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRG 1618
            |.|    |.:.:.:.:..||..:  ..:||.:.|..|:.||.|:.||.|.:||.|:.||..:||.
Mouse   458 DEITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRA 522

  Fly  1619 KTVNEVCALLGAMQGTLTFLIVPAGSPPSVG------------VMGGTTGSQLAGLGGAHRDTAV 1671
            .:..:..|.|......:|  ||....|....            :|..:..|....|..:.:.:  
Mouse   523 ASHEQAAAALKNAGQAVT--IVAQYRPEEYSRFEAKIHDLREQMMNSSVSSGSGSLRTSQKRS-- 583

  Fly  1672 LHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQAYR---EGEEDQTLAGLIPSQ 1733
            |:|||.||||...|..:|.:  |::|:.||:||||:..|..||||.:   :||.|:  .|:|||:
Mouse   584 LYVRALFDYDKTKDSGLPSQ--GLNFRFGDILHVINASDDEWWQARQVTPDGESDE--VGVIPSK 644

  Fly  1734 SFQHQRETMKLAIAEEAGLARSRGKDGS--GSKGATLLCARKGRKKKKK---------------- 1780
            ....::|..:|...:..  :::||..|.  ..|....|.:||....|.|                
Mouse   645 RRVEKKERARLKTVKFN--SKTRGDKGQSFNDKRKKNLFSRKFPFYKNKDQSEQETSDADQHVTS 707

  Fly  1781 --ASSEAGYPLYATTAPDE------TDPEEILTYEEVALYYPRATHKRPIVLIGPPNIGRHELRQ 1837
              :.||:.|.:..|   ||      ...|.:|:||.|  ......:.||::::||       ::.
Mouse   708 NASDSESSYLILIT---DEYGCSKGGQEEYVLSYEPV--NQQEVNYTRPVIILGP-------MKD 760

  Fly  1838 RLMAD-----SERFSAAVPHTSRARREGEVPGVDYHFIT-RQAFEADILARRFVEHGEYEKAYYG 1896
            |:..|     .::|.:.||||:|.:|:.||.|.||||:| |:..|.||...:|:|.|:|....||
Mouse   761 RVNDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKFIEAGQYNNHLYG 825

  Fly  1897 TSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKLRQKKLRNGEPFKEEELK 1961
            ||::::|.|...||.|:|::...::|.|:.:.|.|..:.:.|.|::.:.:...|    ..||:.:
Mouse   826 TSVQSVRAVAEKGKHCILDVSGNAIKRLQIAQLYPISIFIKPKSMENIMEMNKR----LTEEQAR 886

  Fly  1962 DIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQ 2011
            .....|..:|..:...|..|:..:..|..|:|:...|........||||:
Mouse   887 KTFERAMKLEQEFTEHFTAIVQGDTLEDIYNQVKQIIEEQSGPYIWVPAK 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 7/42 (17%)
PDZ_signaling 1562..1640 CDD:238492 24/83 (29%)
SH3_MPP5 1673..1734 CDD:212969 29/63 (46%)
Guanylate_kin 1820..1994 CDD:279019 54/179 (30%)
GuKc 1831..2002 CDD:214504 52/176 (30%)
Dlg1XP_006521824.1 L27_1 2..62 CDD:370268
MAGUK_N_PEST 106..223 CDD:371162 30/132 (23%)
PDZ_signaling 224..308 CDD:238492 17/95 (18%)
PDZ_signaling 317..403 CDD:238492 22/122 (18%)
PDZ_assoc 404..465 CDD:371157 16/94 (17%)
PDZ 463..547 CDD:214570 25/85 (29%)
SH3_DLG1 582..648 CDD:212964 30/71 (42%)
Guanylate_kin 748..926 CDD:366206 56/188 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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