DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and Patj

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:NP_766284.2 Gene:Patj / 12695 MGIID:1277960 Length:1834 Species:Mus musculus


Alignment Length:1870 Identity:323/1870 - (17%)
Similarity:574/1870 - (30%) Gaps:663/1870 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QANSSRSNLSAQSSGTPSASTISSSQGKQQVVEL----------------SGYVIILVENVEGKI 50
            :...::...|..|:.|....|:  ..|..:.|||                ||.|:..:       
Mouse   220 EVGHTQGRASTSSADTTLPETV--CWGHTEEVELINDGSGLGFGIVGGKSSGVVVRTI------- 275

  Fly    51 KLYGSPPDRD-NLEVGDEILEVNGLTLENISRTEVIRHIHDCIKSCTICLRVRKKNDSRLAWDIG 114
             :.|...||| .|:.||.||::.|..::.::..:|.:.:.:|                      |
Mouse   276 -VPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC----------------------G 317

  Fly   115 NSVQDAFVIAVEEHARERLQRLAALNRVTPVDITQLSKKLQQTKSGTATSQRQDLSFLN------ 173
            |||:...       ||:.:..:|    |||.....|...|....:.|..|.|......:      
Mouse   318 NSVRMLV-------ARDPVGEIA----VTPPTPVSLPVALPAVATRTLDSDRSPFETYSVELVKK 371

  Fly   174 --ESTPIYVTSFTSNQITCSSSTMTTATAGGPISAPSLATATTTVPTASSHTTTVVAQIEHGASA 236
              :|..|.:..:.        .|.....|.| |...|:      :|.::::         |....
Mouse   372 DGQSLGIRIVGYV--------GTAHPGEASG-IYVKSI------IPGSAAY---------HNGQI 412

  Fly   237 LVSAAVAAATAADRN--ANSTTSAALKQTANCIGNSTSSLGTTSTTSSQSTSSATGHIYQTSQAQ 299
            .|:..:.|....:..  ||......|:.....:..:.....|:.:.|....||:...:.:..:..
Mouse   413 QVNDKIVAVDGVNIQGFANQDVVEVLRNAGQVVHLTLVRRKTSLSASPFEHSSSRETVAEPPKVP 477

  Fly   300 QQQLQQLQQQLAAAAAAGKPLQAKSLLASSLQHLAEEVDN------EDLDDDD----DVDGA--- 351
            ::              ||.| :.::.|:...:.:.|.:||      :.|:..|    .|.|:   
Mouse   478 ER--------------AGSP-KPEANLSVEAEEIGERLDNLKNNTVQALEKPDVYPEKVPGSPEN 527

  Fly   352 -------NYCGITYISYNNKHAQLPTTTLPATTALPAAAASLATTAAIYQQRQQQQHQQQQQQQQ 409
                   |..|..|        ::...||.|..|                    ...:.|:..:.
Mouse   528 ELKSRWENLLGPDY--------EVMVATLDAQIA--------------------DDEELQKYSKL 564

  Fly   410 QPVH-------------HHNHPPTASQLNRATAPAPLQLGGPVNP-SFVDAQTSTSPLMAQQLH- 459
            .|:|             ||          ..::.||   ||||:. :.:..:.....:...||: 
Mouse   565 LPIHTLRLGMEVDSFDGHH----------YISSVAP---GGPVDTLNLLQPEDELLEVNGMQLYG 616

  Fly   460 -SQHADV----DAAPPSSSSSSAVVVVERHVHGTTTPKTEYSTAISSGQLQQAFAELQL-HSSNN 518
             |:...|    :..||.:      :|..|.:........|..|      ::.|..|.:: ||.:.
Mouse   617 KSRREAVSFLKEVPPPFT------LVCCRRLFDDEASVDEPRT------MEPALLEAEVDHSVDV 669

  Fly   519 NATQQQQQHLLLSNNNNSNNSMAAAQTTASLMKNCD------LLISNNLYPPR-----RELLEDV 572
            |........|.|         .:....|..|:|:|.      |...:.|.|.|     |.|:.|.
Mouse   670 NIEDDDDGELAL---------WSPEVKTVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADG 725

  Fly   573 IVHQASD---------VHSYSTSASAAAIASSSNRSQQQQQQQQQHQLLSAA------------- 615
            :..::.:         |:.:|...:..|.|.               ::|.|.             
Mouse   726 VAERSGELLPGDRLVSVNEFSLDNATLAEAV---------------EVLKAVPPGVVHLGICKPL 775

  Fly   616 YELQQQQQLQLQQQQQQQNS-PTSSISIGRTELLLGDQSLRQDPRGNRRRSGSSIVVLDGDDLKP 679
            .|.:::::..|.......:| |..::....:.|:|      :.|:|.|.              :|
Mouse   776 VEDEKEERFSLHSNNNGDSSEPADAVHEIHSSLIL------EAPQGFRD--------------EP 820

  Fly   680 CLPDDYISGQHHLNHQQQLQLQQQLQQQHPLQQQHYRTHSGDIREIDQ-----EMLTMLSVNQD- 738
            .|.:  :..:..|:..:.||.||                    :::|.     ||...||...| 
Mouse   821 YLEE--LVDEPFLDLGKSLQFQQ--------------------KDVDSSSEAWEMHEFLSPPLDG 863

  Fly   739 NGPHREMAVD-----CPDTFIARNKTPPRYPPPRPPQKHKKSTNTTTTTTITALTNNDHANKMLI 798
            .|..|||.||     ..|...|....||      ||                             
Mouse   864 RGEEREMLVDEEYELYQDHLRAMESNPP------PP----------------------------- 893

  Fly   799 VAYHSSHQHEQLQQQHPSKTSTTTTTIALDVATQNLYNQKQQNKLEQIENYENCLQSERNEQHEQ 863
                           |..:.:..:..:.|...||.|              :.|....||.|.|:.
Mouse   894 ---------------HIREAAPASPVLELQAGTQWL--------------HANLSGGERLECHDA 929

  Fly   864 QF------EQQKQHQATTA--MAATQVAQQQTPSHKLQATLSSDPNG-NSNSNNNSHIVGISSSS 919
            :.      ::.:|:..:||  |..|.....:.|      ..||:.|| :...::..|:..::|||
Mouse   930 ESMMSAYPQEMQQYSYSTADMMEETFGLDSRAP------IPSSEGNGQHGRFDDMGHLHSLTSSS 988

  Fly   920 SSNNSSITDDF-----LCVVDGLYQGRKDTASP----SSSAFDEVMSKHTLDSFGSIAYRHLH-- 973
            ......|..|.     |..:..:.|.|:....|    .|:......|.|    .|.::.||.:  
Mouse   989 LDLGMMIPSDLQGPGVLVDLPAVAQRREQEDLPLYRLPSARVVTKPSSH----MGLVSSRHANAA 1049

  Fly   974 ------QQHQATSNGNSS-------------SNTSNTNSNTNSNTNSNSNTNGN----------- 1008
                  ::.:.....|.|             .|.|...|.....|......||.           
Mouse  1050 CELPEREEGEGEETPNFSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVL 1114

  Fly  1009 ----TSNNTAVSTKTATVTKTGVSSSNSNSNSLNSSNSSMHTSSSSSGHSSNIASATSSSSATSS 1069
                .....|:.|....:..:||...       |:|::....:..|:|:.......:.||:....
Mouse  1115 EDSPAGKTNALKTGDKILEVSGVDLQ-------NASHAEAVEAIKSAGNPVVFVVQSLSSTPRVI 1172

  Fly  1070 STVPDDLSLAPPGYEVSQQQQ--QQHLVATPVTMLLPP-MAKHRELPVDVPDSFIEMVKTTPRY- 1130
            .||.:......|..:.:.|::  ::|..|.|...|.|| .|...::.....|..:...|...|| 
Mouse  1173 PTVNNKGKTPAPNQDQNTQERKAKRHGTAPPPMKLPPPYRAPSADMEGSEEDCALTDKKIRQRYA 1237

  Fly  1131 --PPPAHL-----SSRGSLLS-NGSASTAHTTLSSMGVAPSPVTATAAAAASASAACATTAVAAA 1187
              |...|:     ...|..|| .|:...:..::..:|:.|                         
Mouse  1238 DLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINP------------------------- 1277

  Fly  1188 AVSGVADGDAR-RVADEL------------NGNAKPV---PPPRDHL---RVEKDGRLVNCSPAP 1233
              .|.|..|.| |:.|||            :.||..:   .|.|..|   |.|.....:..:|.|
Mouse  1278 --EGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPTRVKLVFIRNEDAVSQMAVAPFP 1340

  Fly  1234 QLPDRRAPGNASSGSSGATTHPLQHQQIAQIVEPTLEQLDSIKKYQEQLRRRREEEERIAQQNEF 1298
            :|....:|.....|:...::..........:.||...:.:.:.:.        .::..:|:|.  
Mouse  1341 ELSHSPSPVEDLGGTELVSSEEESSVDAKHLPEPESSKPEDLSQV--------VDDNMVAEQQ-- 1395

  Fly  1299 LRNSLRGSRKLKALQDTATPGKAVAQQQQQATLATQVVGVENEAYLPDEDQPQAE----QIDGYG 1359
                          :::.:|..|..|.:|| |.:|||.....::  |....|..:    .:.|.|
Mouse  1396 --------------KESESPDSAACQIKQQ-TYSTQVSSSSQDS--PSSPAPLCQSAHADVTGSG 1443

  Fly  1360 ELIAALTRLQNQLSKSGLSTLAGRVSAAHSVLASASVAHVLAARTAVLQRRRSRVSGPLHHSSLG 1424
            ...|.|     .:..:.||             ...:...::..:..:::..:.|       |.||
Mouse  1444 NFQAPL-----PVDPAPLS-------------VDPATCPIVPGQEMIIEISKGR-------SGLG 1483

  Fly  1425 LQ----KD------IVELLTQSNTAAAIELGNLLTSHEMEGLLLAHDRI----------ANHTDG 1469
            |.    ||      ::..:.:...||            .:|.|.|.|:|          ::|.:.
Mouse  1484 LSIVGGKDTPLDAIVIHEVYEEGAAA------------RDGRLWAGDQILEVNGVDLRSSSHEEA 1536

  Fly  1470 TPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPPPLAQRGAMPLPRGESPPPVPMPP 1534
            ..:...||                                     |:..:.:.|.|:.       
Mouse  1537 ITALRQTP-------------------------------------QKVRLVVYRDEAQ------- 1557

  Fly  1535 LATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKST-EPLGATV--RNEGEAVVIGRIVRGGAA 1596
                               ..:::|..:.::.::|.| ..||.::  :..|..|.|..||:||||
Mouse  1558 -------------------YRDEENLEVFLVDLQKKTGRGLGLSIVGKRSGSGVFISDIVKGGAA 1603

  Fly  1597 EKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLI--VPAGS 1644
            :..|.|..||:||.|||:::|..:...|..:|..:||.:...|  :.|||
Mouse  1604 DLDGRLIRGDQILSVNGEDMRHASQETVATILKCVQGLVQLEIGRLRAGS 1653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492 12/48 (25%)
L27 1423..1466 CDD:295425 12/62 (19%)
PDZ_signaling 1562..1640 CDD:238492 28/82 (34%)
SH3_MPP5 1673..1734 CDD:212969
Guanylate_kin 1820..1994 CDD:279019
GuKc 1831..2002 CDD:214504
PatjNP_766284.2 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492 22/113 (19%)
PDZ_signaling 363..450 CDD:238492 14/110 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..488 6/46 (13%)
PDZ_signaling 572..636 CDD:238492 14/82 (17%)
PDZ 685..774 CDD:214570 17/103 (17%)
PDZ_signaling 1072..1163 CDD:238492 14/97 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1219 11/47 (23%)
PDZ 1242..1327 CDD:214570 20/111 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1453 23/144 (16%)
MPDZ_u10 <1453..1468 CDD:374710 2/27 (7%)
PDZ 1469..1554 CDD:214570 18/140 (13%)
PDZ_signaling 1566..1646 CDD:238492 27/79 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1657..1676
PDZ_signaling 1707..1792 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1811..1834
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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