DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and mpp7b

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_021324128.1 Gene:mpp7b / 101882129 ZFINID:ZDB-GENE-141212-293 Length:298 Species:Danio rerio


Alignment Length:365 Identity:114/365 - (31%)
Similarity:172/365 - (47%) Gaps:101/365 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1407 LQRRRSRVSGPLHHSSLGLQKDIVELLTQS-NTAAAIELGNLLTSHEMEGLLLAHDRIANHTDGT 1470
            ||:.|::...||..|:.||...:.|.|..: |:....||.|||:...::.|||.||.:|.     
Zfish    14 LQKYRAQRPAPLLDSTQGLAHRLAEELQDTVNSPETTELLNLLSKPHVQTLLLVHDVVAQ----- 73

  Fly  1471 PSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPPPLAQRGAMPLPRGESPPPVPMPPL 1535
                                      ||          ..|.|              ||:|    
Zfish    74 --------------------------KR----------FDPRL--------------PPLP---- 84

  Fly  1536 ATMPMSMPVNLPMSACFGTLNDQN-DNIRIIQIEKSTEPLGATVRNE--GEAVVIGRIVRGGAAE 1597
                       |:..|    |::: |:|:|:.:.|:.||||||::.:  ..|:::.|::|||||:
Zfish    85 -----------PLPDC----NEEDEDSIKIVCLVKNQEPLGATIKRDESSGAIIVARVMRGGAAD 134

  Fly  1598 KSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGGTTGSQLAGL 1662
            :|||:||||.:.||||..:..|.:.|:..:|...:|.:||.:||.            |..:|   
Zfish   135 RSGLIHEGDMLKEVNGVPVEDKNLQEIIPILAKSEGAVTFKVVPG------------TNEEL--- 184

  Fly  1663 GGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQAYREGEEDQTLA 1727
              ...||.|. |||.|||||:.|..||||:.|:.||:||||.::|::|..||||.|.|:.: ..|
Zfish   185 --ETNDTQVF-VRALFDYDPQADPAIPCRDAGLEFQRGDVLQIVSQDDDTWWQARRHGDAN-LRA 245

  Fly  1728 GLIPSQSFQHQRETMK----LAIAEEAGLARSRGKDGSGS 1763
            |||||:..|.:|..::    |..:.....|.|...:|:.|
Zfish   246 GLIPSRQLQERRVMLQRPEVLFHSPRVSRAFSDNMEGNSS 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 16/43 (37%)
PDZ_signaling 1562..1640 CDD:238492 33/79 (42%)
SH3_MPP5 1673..1734 CDD:212969 34/60 (57%)
Guanylate_kin 1820..1994 CDD:279019
GuKc 1831..2002 CDD:214504
mpp7bXP_021324128.1 L27 31..74 CDD:308467 16/73 (22%)
PDZ 97..179 CDD:214570 34/81 (42%)
SH3_MPP 192..252 CDD:212796 34/61 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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