DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and mpp4a

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_009302812.1 Gene:mpp4a / 100535324 ZFINID:ZDB-GENE-070912-523 Length:627 Species:Danio rerio


Alignment Length:735 Identity:202/735 - (27%)
Similarity:328/735 - (44%) Gaps:178/735 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1346 DEDQPQAEQIDGYGELIAALTRLQNQLSKSGLSTLAGRVSAAHSVLASASVAHVLAARTAVLQRR 1410
            :|...|:...|....|...|..:..::.:|....:.| ....||:|::..:..:|.....::|..
Zfish     7 EESMAQSAYDDNDAGLAQVLAEVLEEVRQSIDRDING-ADLLHSLLSAPWLYSLLRVYECLVQHS 70

  Fly  1411 RSRVSGPLHHSSLGLQKDIVELLTQSNTAA----------AIELGNLLTSHEMEGLLLAHDRIAN 1465
            :...:..|.:|:         .|:|..||:          |.||..||.|..|:.||.|||.:| 
Zfish    71 QDAPNPYLPYST---------RLSQEITASVRGLPAPSSDAQELYILLKSPHMQALLSAHDSVA- 125

  Fly  1466 HTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPPPLAQRGAMPLPRGESPPPV 1530
                                           :|:.|.|:||                        
Zfish   126 -------------------------------QRDYGPVLPP------------------------ 135

  Fly  1531 PMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKSTEPLGATVRNEGEA--VVIGRIVRG 1593
                       :|.|         |:|..:.:||:.:.|:.:|||||:|.:.:.  :.|.|::.|
Zfish   136 -----------LPDN---------LSDNEEAVRIVCLVKNKQPLGATIRKDEKTGNIFIARVIHG 180

  Fly  1594 GAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGGTTGSQ 1658
            |.|::||||:.||:::|||||::||.....|..:|...||.:.|.::|..:.|        |.||
Zfish   181 GLADRSGLLNSGDKLVEVNGQKVRGMQPEHVINILVRSQGNILFKVIPNSTQP--------TNSQ 237

  Fly  1659 LAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQAYREGEED 1723
                       |.|:|||..||.|..|..|||.::|::|.|||:|.::.:.|..|||| |:....
Zfish   238 -----------ATLYVRAMVDYSPLQDPAIPCPDVGMAFSKGDLLEIVDQRDIRWWQA-RKLHSA 290

  Fly  1724 QTLAGLIPS-QSFQH-QRE--------------------------TMKLAIA----EEAGLARSR 1756
            ....||||| ..|:| |||                          |.|:...    |:.......
Zfish   291 SLCCGLIPSTNQFRHKQRELWWSQPYQAHTCIRPLSADDVGEEEITDKIKCTETDEEDFEFVSEE 355

  Fly  1757 GKDG--------SGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVALYY 1813
            |::|        :|.:.:..:..||...|:|.:...........|:.:        .|||| ::|
Zfish   356 GENGEHMQGLYIAGFRHSLRVWRRKSYSKRKPSCYSCSISSCHNTSAN--------LYEEV-VHY 411

  Fly  1814 PRATHKRP--IVLIGPPNIGRHELRQRLM-ADSERFSAAVPHTSRARREGEVPGVDYHFITRQAF 1875
            .|.....|  ||||||..:|.:|||:||: .:...:...|.:|:|.:..||..|.:|||:|::.|
Zfish   412 QRHIDDPPRLIVLIGPSGVGVNELRRRLIKINPNTYQGPVSYTTRPQNMGEKNGREYHFVTKEVF 476

  Fly  1876 EADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPS 1940
            ...::..:|.|:.|:....|||||::::.|:.:|||||:::.|..::.:|...||||::.|.|||
Zfish   477 AYMVVNHKFYEYEEHNGHMYGTSLDSVKDVLDNGKICVIDIEPHCIQSVRNKMLKPYIIYVRPPS 541

  Fly  1941 LDKLRQKK-----LRN---GEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAE 1997
            .:.:||.:     |.|   ...|.:::.:||...:|.|||::...||.:|:|.|.:.:...|...
Zfish   542 PEGMRQTRKDPHFLANRYIKRYFHDKDFEDIEDVSRAMEAKYRQFFDCVIVNEDLQDSCMDLFTA 606

  Fly  1998 INSLEREPQWVPAQWVHNNR 2017
            |...:.||||:||.|...:|
Zfish   607 IQHAQEEPQWIPASWFTPDR 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 17/52 (33%)
PDZ_signaling 1562..1640 CDD:238492 32/79 (41%)
SH3_MPP5 1673..1734 CDD:212969 27/61 (44%)
Guanylate_kin 1820..1994 CDD:279019 64/184 (35%)
GuKc 1831..2002 CDD:214504 59/179 (33%)
mpp4aXP_009302812.1 L27 24..76 CDD:197794 8/52 (15%)
L27 84..133 CDD:308467 19/80 (24%)
PDZ 147..230 CDD:214570 33/82 (40%)
SH3 241..300 CDD:327375 26/59 (44%)
Guanylate_kin 419..610 CDD:331880 66/190 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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