DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and mpp4

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_031749716.1 Gene:mpp4 / 100495166 XenbaseID:XB-GENE-988529 Length:684 Species:Xenopus tropicalis


Alignment Length:804 Identity:198/804 - (24%)
Similarity:336/804 - (41%) Gaps:235/804 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1318 PGKAVAQQQQQATLATQVVGVENEAYLPDEDQPQAEQIDGYGELIAALTRLQNQLSKSGLSTLAG 1382
            |.||....:...|:               |..|...|.:|..::   ||.:..:|.......:.|
 Frog     4 PQKATESLRMHETM---------------EMTPSGLQENGLSQV---LTMVLEELGLYYHQDVNG 50

  Fly  1383 RVSAAHSVLASASVAHVLAARTAVLQRRRSRVSGPLHHSSLGLQKDIVELLTQSNTAAAI-ELGN 1446
             :...:::|.:..:..:|...:.:.|..:.|.. |:...:..|..::|.:|.::.::|.: ||..
 Frog    51 -IGVLYNLLQAPWLQSLLKVHSCLQQYIQQRPQ-PVLPKACILSNEVVGVLRETTSSADLRELKR 113

  Fly  1447 LLTSHEMEGLLLAHDRIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPP 1511
            ||.....:.||.|||.:|....                                     .||:||
 Frog   114 LLQGPHFKALLSAHDMVAQADF-------------------------------------EPVLPP 141

  Fly  1512 PLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKSTEPLGA 1576
                                          :|.|:|         |..:.:||:.:.|:.:||||
 Frog   142 ------------------------------LPDNIP---------DNEEAMRIVCLVKNKQPLGA 167

  Fly  1577 TVRNE---GEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFL 1638
            |::..   |: :::.|::.||.|::||||:.||:::||||..:.|....:|..:|...:||:.|.
 Frog   168 TIKRHEITGD-IIVARVIHGGLADRSGLLYAGDKLVEVNGVLVDGLEPEQVIQILARSEGTIVFK 231

  Fly  1639 IVPAGSPPSVGVMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVL 1703
            :    ||.:...:...|               :|:|||..||.|:.|..|||.:.|:.||:|::|
 Frog   232 L----SPVNDRYISSHT---------------MLYVRAMADYWPQQDPAIPCADAGLPFQRGEIL 277

  Fly  1704 HVISREDPNWWQAYREGEEDQTLAGLIP--------------SQSF------------------- 1735
            .::.:.|..|||| |:..:....|||||              ||.|                   
 Frog   278 QIVDQNDSLWWQA-RKASDLGRCAGLIPSNHLLKRKQREFWWSQPFMSHSCIKASQLSTIGEEED 341

  Fly  1736 ---------------------------------------------------------QHQRETMK 1743
                                                                     |.||...:
 Frog   342 MKIEEKFVEADEETFESEELKGGNVICKFFCSVHRNSNHLVQDIYISMPQDLATIWMQPQRHNYR 406

  Fly  1744 LAIAEEAGLARSRGKDG---SGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILT 1805
            |....:......|.|||   :|.:.:..||.||.........|......|.|.|         ..
 Frog   407 LEYFGQEKEDEFRDKDGNIIAGFRRSMRLCRRKTLINHMSCYSRCPSNCYHTVA---------AP 462

  Fly  1806 YEEVALYYPRATHK-RPIVLIGPPNIGRHELRQRLM-ADSERFSAAVPHTSRARREGEVPGVDYH 1868
            ||||..|..|...: |.|||:||..:|.:|:|::|: .:...|.:.||||:|.::..|..|.:|.
 Frog   463 YEEVVRYQRRPCDRHRLIVLLGPSGVGVNEMRKQLIDLNPSMFKSPVPHTTRQKKTYEENGREYF 527

  Fly  1869 FITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYV 1933
            |::::|||:.:.:..|:|:|||....||||:||::.|:.:|.||:::|.||.:..:|..:||||:
 Frog   528 FVSKEAFESMVYSHGFLEYGEYNGHMYGTSVEAVKAVLDAGMICIIDLEPQCITGVRTHELKPYI 592

  Fly  1934 VLVAPPSLDKLRQKKLRNGE---------PFKEEELKDIIATARDMEARWGHLFDMIIINNDTER 1989
            :.:.|||.:.:|..: :|..         .||||:.::|..:|:.||.::|..||.:::|::.|.
 Frog   593 IFIKPPSRNCMRYTR-KNASIFTDYYVNMKFKEEDFQEIEESAKKMEVQFGQFFDQVVVNDNLES 656

  Fly  1990 AYHQLLAEINSLEREPQWVPAQWV 2013
            |..||::.:...:.||||:||.|:
 Frog   657 ATVQLMSILRCAQDEPQWIPASWI 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 14/43 (33%)
PDZ_signaling 1562..1640 CDD:238492 29/80 (36%)
SH3_MPP5 1673..1734 CDD:212969 27/74 (36%)
Guanylate_kin 1820..1994 CDD:279019 65/183 (36%)
GuKc 1831..2002 CDD:214504 61/180 (34%)
mpp4XP_031749716.1 L27 36..84 CDD:413432 6/49 (12%)
L27 91..139 CDD:397114 15/84 (18%)
PDZ 153..232 CDD:214570 29/79 (37%)
SH3_MPP4 247..307 CDD:212967 26/60 (43%)
Guanylate_kin 478..666 CDD:395500 67/188 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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