DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdt and mpp4

DIOPT Version :10

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_031749716.1 Gene:mpp4 / 100495166 XenbaseID:XB-GENE-988529 Length:684 Species:Xenopus tropicalis


Alignment Length:804 Identity:198/804 - (24%)
Similarity:336/804 - (41%) Gaps:235/804 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1318 PGKAVAQQQQQATLATQVVGVENEAYLPDEDQPQAEQIDGYGELIAALTRLQNQLSKSGLSTLAG 1382
            |.||....:...|:               |..|...|.:|..::   ||.:..:|.......:.|
 Frog     4 PQKATESLRMHETM---------------EMTPSGLQENGLSQV---LTMVLEELGLYYHQDVNG 50

  Fly  1383 RVSAAHSVLASASVAHVLAARTAVLQRRRSRVSGPLHHSSLGLQKDIVELLTQSNTAAAI-ELGN 1446
             :...:::|.:..:..:|...:.:.|..:.|.. |:...:..|..::|.:|.::.::|.: ||..
 Frog    51 -IGVLYNLLQAPWLQSLLKVHSCLQQYIQQRPQ-PVLPKACILSNEVVGVLRETTSSADLRELKR 113

  Fly  1447 LLTSHEMEGLLLAHDRIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPP 1511
            ||.....:.||.|||.:|....                                     .||:||
 Frog   114 LLQGPHFKALLSAHDMVAQADF-------------------------------------EPVLPP 141

  Fly  1512 PLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKSTEPLGA 1576
                                          :|.|:|         |..:.:||:.:.|:.:||||
 Frog   142 ------------------------------LPDNIP---------DNEEAMRIVCLVKNKQPLGA 167

  Fly  1577 TVRNE---GEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFL 1638
            |::..   |: :::.|::.||.|::||||:.||:::||||..:.|....:|..:|...:||:.|.
 Frog   168 TIKRHEITGD-IIVARVIHGGLADRSGLLYAGDKLVEVNGVLVDGLEPEQVIQILARSEGTIVFK 231

  Fly  1639 IVPAGSPPSVGVMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVL 1703
            :    ||.:...:...|               :|:|||..||.|:.|..|||.:.|:.||:|::|
 Frog   232 L----SPVNDRYISSHT---------------MLYVRAMADYWPQQDPAIPCADAGLPFQRGEIL 277

  Fly  1704 HVISREDPNWWQAYREGEEDQTLAGLIP--------------SQSF------------------- 1735
            .::.:.|..|||| |:..:....|||||              ||.|                   
 Frog   278 QIVDQNDSLWWQA-RKASDLGRCAGLIPSNHLLKRKQREFWWSQPFMSHSCIKASQLSTIGEEED 341

  Fly  1736 ---------------------------------------------------------QHQRETMK 1743
                                                                     |.||...:
 Frog   342 MKIEEKFVEADEETFESEELKGGNVICKFFCSVHRNSNHLVQDIYISMPQDLATIWMQPQRHNYR 406

  Fly  1744 LAIAEEAGLARSRGKDG---SGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILT 1805
            |....:......|.|||   :|.:.:..||.||.........|......|.|.|         ..
 Frog   407 LEYFGQEKEDEFRDKDGNIIAGFRRSMRLCRRKTLINHMSCYSRCPSNCYHTVA---------AP 462

  Fly  1806 YEEVALYYPRATHK-RPIVLIGPPNIGRHELRQRLM-ADSERFSAAVPHTSRARREGEVPGVDYH 1868
            ||||..|..|...: |.|||:||..:|.:|:|::|: .:...|.:.||||:|.::..|..|.:|.
 Frog   463 YEEVVRYQRRPCDRHRLIVLLGPSGVGVNEMRKQLIDLNPSMFKSPVPHTTRQKKTYEENGREYF 527

  Fly  1869 FITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYV 1933
            |::::|||:.:.:..|:|:|||....||||:||::.|:.:|.||:::|.||.:..:|..:||||:
 Frog   528 FVSKEAFESMVYSHGFLEYGEYNGHMYGTSVEAVKAVLDAGMICIIDLEPQCITGVRTHELKPYI 592

  Fly  1934 VLVAPPSLDKLRQKKLRNGE---------PFKEEELKDIIATARDMEARWGHLFDMIIINNDTER 1989
            :.:.|||.:.:|..: :|..         .||||:.::|..:|:.||.::|..||.:::|::.|.
 Frog   593 IFIKPPSRNCMRYTR-KNASIFTDYYVNMKFKEEDFQEIEESAKKMEVQFGQFFDQVVVNDNLES 656

  Fly  1990 AYHQLLAEINSLEREPQWVPAQWV 2013
            |..||::.:...:.||||:||.|:
 Frog   657 ATVQLMSILRCAQDEPQWIPASWI 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ <54..100 CDD:214570
PDZ_MPP5-like 1563..1641 CDD:467259 29/80 (36%)
SH3_MPP5 1673..1734 CDD:212969 27/74 (36%)
GuKc 1831..2002 CDD:214504 61/180 (34%)
mpp4XP_031749716.1 L27 36..84 CDD:470651 6/49 (12%)
L27 91..139 CDD:460717 15/84 (18%)
PDZ_MPP3-MPP4-MPP7-like 154..234 CDD:467260 29/84 (35%)
SH3_MPP4 247..307 CDD:212967 26/60 (43%)
Guanylate_kin 478..666 CDD:395500 67/188 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.