DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdt and mpp2

DIOPT Version :9

Sequence 1:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster
Sequence 2:XP_012826953.1 Gene:mpp2 / 100124723 XenbaseID:XB-GENE-961053 Length:559 Species:Xenopus tropicalis


Alignment Length:612 Identity:192/612 - (31%)
Similarity:292/612 - (47%) Gaps:137/612 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1418 LHHSSLGLQKDIVELL--TQSNTAAAIELGNLLTSHEMEGLLLAHDRIANHTDGTPSPTPTPTPA 1480
            :..::|.|.::|::.:  .:..:..|.||..:|.....:.||..||.:|:....||.|:|...| 
 Frog    70 VRENNLQLVQEILQDMAGVRDPSGVAAELQGILQEPHFQSLLQTHDSVASKNYETPPPSPMLDP- 133

  Fly  1481 IGAATGSTLSSPVAGPKRNLGMVVPPPVVPPPLAQRGAMPLPRGESPPPVPMPPLATMPMSMPVN 1545
                   |||:.                                      |:||           
 Frog   134 -------TLSNQ--------------------------------------PVPP----------- 142

  Fly  1546 LPMSACFGTLNDQNDNIRIIQIEKST-EPLGATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEIL 1609
                          |.:|::.|.||. |.||.|.|.||..:||.||:.||..::.||||.||.|.
 Frog   143 --------------DAVRMVGIRKSAGEHLGVTFRVEGGELVIARILHGGVIDQQGLLHVGDVIR 193

  Fly  1610 EVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAGSPPSVGVMGGTTGSQLAGLGGAHRDTAVLH- 1673
            ||||:|: |.....:..:|....|::...|:|                       ::::...|. 
 Frog   194 EVNGREV-GSDPQALQEMLREASGSVVLKILP-----------------------SYQEQHPLRQ 234

  Fly  1674 --VRAHFDYDPEDDLYIPCRELGISFQKGDVLHVISREDPNWWQA--YREGEEDQTLAGLIPSQS 1734
              |:.||.|||..|..|||:|.|:.|:.||:|.::::||||||||  .:.|     .|||||||.
 Frog   235 VFVKCHFSYDPSSDSLIPCKEAGLPFKAGDLLQIVNQEDPNWWQACLVKGG-----TAGLIPSQL 294

  Fly  1735 FQHQRETMKLAIAEEAGLARSRGKDGSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETD 1799
            .:.:|:...             .:||..:..::.||...|.||||:.       :|.||...|.|
 Frog   295 LEEKRKAFV-------------KRDGEFTPNSSALCGSIGGKKKKRI-------MYVTTKNAEFD 339

  Fly  1800 PEEILTYEEVALYYPRATHKRPIVLIGPPNIGRHELRQRLM-ADSERFSAAVPHTSRARREGEVP 1863
            ..|:|.|||||...|  ..::.::|||...:||..|:.:|: :|..|:...:|:|||.|:|||..
 Frog   340 RHELLIYEEVARMPP--FRRKTLILIGAQGVGRRSLKNKLLTSDPSRYGTTIPYTSRKRKEGEWD 402

  Fly  1864 GVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASD 1928
            |..|.|:||...|.||.|.|::||||||...|||.:.:|:.||||||:|||:::||::|:||.::
 Frog   403 GQSYSFVTRAEMEQDIKAGRYLEHGEYEGNLYGTKISSIQEVVASGKMCVLDVNPQAVKVLRTAE 467

  Fly  1929 LKPYVVLVAPPSLDKLRQKKLR------NGEPFKEEELKDIIATARDMEARWGHLFDMIIINNDT 1987
            ..||||.|..|....|:...|.      ..:...:.||..|:..:..::..:||.||:.::|.|.
 Frog   468 FVPYVVFVGAPDFQTLKSNNLSAVEVGITNKQLTDAELLRIVEESERLQQAYGHYFDLTLVNYDL 532

  Fly  1988 ERAYHQLLAEINSLEREPQWVPAQWVH 2014
            ::.:.:|...:..|..||||||..||:
 Frog   533 DQTFQELQVALEKLNSEPQWVPVSWVY 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 12/44 (27%)
PDZ_signaling 1562..1640 CDD:238492 32/78 (41%)
SH3_MPP5 1673..1734 CDD:212969 31/65 (48%)
Guanylate_kin 1820..1994 CDD:279019 68/180 (38%)
GuKc 1831..2002 CDD:214504 66/177 (37%)
mpp2XP_012826953.1 L27 75..126 CDD:367207 13/50 (26%)
PDZ_signaling 145..223 CDD:238492 32/78 (41%)
SH3 236..294 CDD:388381 31/62 (50%)
Guanylate_kin 356..546 CDD:366206 69/189 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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