DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sad and LUT1

DIOPT Version :10

Sequence 1:NP_650123.1 Gene:sad / 44858 FlyBaseID:FBgn0003312 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_190881.2 Gene:LUT1 / 824479 AraportID:AT3G53130 Length:539 Species:Arabidopsis thaliana


Alignment Length:524 Identity:113/524 - (21%)
Similarity:196/524 - (37%) Gaps:155/524 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GLPVVGTLVDLIA--AGGATH--LHKYIDARHKQYGPIFRERLGGTQDAVFVSSANLMRGVFQHE 124
            |:|:....:|.:|  .|||..  |:|:::    :||||:| ...|.::.|.||...:.:.|.::.
plant    78 GIPIANAKLDDVADLLGGALFLPLYKWMN----EYGPIYR-LAAGPRNFVIVSDPAIAKHVLRNY 137

  Fly   125 GQYPQHPLPDAWTLYNQQHACQRGLFFMEGAEWLHNRRILNRLLLNGNLNWMDVHIE----SCTR 185
            .:|.:..:.:.     .:.....|....||..|...||.:...|   :..::.|.:|    .|..
plant   138 PKYAKGLVAEV-----SEFLFGSGFAIAEGPLWTARRRAVVPSL---HRRYLSVIVERVFCKCAE 194

  Fly   186 RMVDQWKRRTAEAAAI------------------------------PLAES-------GEIRSYE 213
            |:|::.:....:.:|:                              |:.|:       .|:||.:
plant   195 RLVEKLQPYAEDGSAVNMEAKFSQMTLDVIGLSLFNYNFDSLTTDSPVIEAVYTALKEAELRSTD 259

  Fly   214 LPLLEQQLYRWSIEVLCCIMFGTSVLTCPKIQSSLDYFTQIVHKVFEHSSRLMTFPPRLAQILRL 278
            |      |..|.|:.||.|:        |: |...:....::.:..|                  
plant   260 L------LPYWKIDALCKIV--------PR-QVKAEKAVTLIRETVE------------------ 291

  Fly   279 PIWRDFEANVDEVL-REGAAIIDHCIRVQEDQRRPHDEALYHRLQAA--DVPGDMIKRIFVDLVI 340
                |..|...|:: |||..|.|      |:.....|.::...|.|:  :|....::...:.:::
plant   292 ----DLIAKCKEIVEREGERIND------EEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLV 346

  Fly   341 AAGDTTAFSSQWALFALSKEPRLQQRLAKERATNDSRLMHG----------------LIKESLRL 389
            |..:||.....|.|:.|||.....::..:|    ..|::.|                .|.||:||
plant   347 AGHETTGSVLTWTLYLLSKNSSALRKAQEE----VDRVLEGRNPAFEDIKELKYITRCINESMRL 407

  Fly   390 YPVAP-FIGRYLPQDAQLGGHFIEKDTMVLLSLYTAGRDPSHFEQPERVLPERWCI-----GETE 448
            ||..| .|.|....|...|.:.:.....:::|:|...|....:|:.|..||||:.|     .||.
plant   408 YPHPPVLIRRAQVPDILPGNYKVNTGQDIMISVYNIHRSSEVWEKAEEFLPERFDIDGAIPNETN 472

  Fly   449 QVHKSHGSLPFAIGQRSCIGRRVALKQ----LHSLLGRCAAQFEMSCLNEMPVDSVLRMVTVPDR 509
            ...|   .:||:.|.|.|:|.:.||.:    |...|.|                  |.:..|||:
plant   473 TDFK---FIPFSGGPRKCVGDQFALMEAIVALAVFLQR------------------LNVELVPDQ 516

  Fly   510 TLRL 513
            |:.:
plant   517 TISM 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sadNP_650123.1 CYP24A1-like 91..512 CDD:410677 104/490 (21%)
LUT1NP_190881.2 PLN02936 56..539 CDD:178524 113/524 (22%)

Return to query results.
Submit another query.