DRSC/TRiP Functional Genomics Resources

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Protein Alignment sad and npp-24

DIOPT Version :9

Sequence 1:NP_650123.1 Gene:sad / 44858 FlyBaseID:FBgn0003312 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001379685.1 Gene:npp-24 / 3564830 WormBaseID:WBGene00022672 Length:655 Species:Caenorhabditis elegans


Alignment Length:359 Identity:66/359 - (18%)
Similarity:110/359 - (30%) Gaps:149/359 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 TSVLTCPKIQSSLDYFTQIVH-KVFE--HSSR-------------------LMTFPPRLAQILRL 278
            ||..:...|.|..|::|..|| ..|:  ::.|                   :.|..||:..:.  
 Worm   205 TSHFSIISIDSDCDFYTSFVHFSCFKEGYAPRIHRIEPVDGLPCDPLDLRYIQTTNPRICSVF-- 267

  Fly   279 PIWRDFEANVDEVLREGAAIIDHCI--------------------------RVQEDQRR------ 311
                        ||..|..::.|.:                          |:.::|.|      
 Worm   268 ------------VLVSGGGVLSHLVVFPNEFGEFRFLVKDQLRLPSSNGDPRIVQNQIRSLKVSR 320

  Fly   312 ---------------PHDEALYHRLQAADVPGDMIKRIFVDLVIAA---GDTTAFSSQWALFALS 358
                           |..|||......:.:..:......||.||.:   .:||.::...||.|:|
 Worm   321 YEIATSSSLFSVNIFPWFEALTSISPTSTLEKETRVSELVDAVIPSDELSNTTKWTGARALRAVS 385

  Fly   359 KEPRLQQRLA---KERATNDSRLMHGLIKES-----LRLYPVAPFIGRYLPQDAQLGGHFIEKDT 415
            .:  |.|.||   :|.......:||.:|.|:     ..|:.::.|...:..::..          
 Worm   386 VQ--LTQSLATEEEELLPESENIMHLVILENKDGQPAHLFNISTFDNIWSTENKT---------- 438

  Fly   416 MVLLSLYTAGRDPSHFEQPERVLPERWCIGETEQVHKSHGSLPFAIGQRSCIGRRVALKQLHSL- 479
                   :.|||  ...||..               ||.|||.               :||.:| 
 Worm   439 -------SFGRD--SVSQPPM---------------KSTGSLE---------------QQLAALK 464

  Fly   480 -LGRCAAQFEMSCLNEMPVDSVLRMVTVPDRTLR 512
             |..|....::||  |..:|:.::.....|..|:
 Worm   465 PLAACVISEKVSC--EEAIDAAMKFFDAVDERLK 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sadNP_650123.1 p450 63..497 CDD:299894 63/342 (18%)
npp-24NP_001379685.1 Nup88 26..>212 CDD:401976 2/6 (33%)
Smc <455..>653 CDD:224117 13/59 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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