DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sad and Cyp27b1

DIOPT Version :10

Sequence 1:NP_650123.1 Gene:sad / 44858 FlyBaseID:FBgn0003312 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_034139.2 Gene:Cyp27b1 / 13115 MGIID:1098274 Length:507 Species:Mus musculus


Alignment Length:488 Identity:140/488 - (28%)
Similarity:215/488 - (44%) Gaps:61/488 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VKGLPVVGTLVDLIAAGGATHLHKYIDARHKQYGPIFRERLGGTQDAVFVSSANLMRGVFQHEGQ 126
            :.|...:..|.:|...||.:.||:.......:||||:.... ||...|:|:...|:..:.:.|..
Mouse    40 IPGPSTLSFLAELFCKGGLSRLHELQVHGAARYGPIWSGSF-GTLRTVYVADPTLVEQLLRQESH 103

  Fly   127 YPQHPLPDAWTLYNQQHACQRGLFFMEGAEWLHNRRILNRLLLN-----GNLNWMDVHIESCTRR 186
            .|:.....:|..:.::|....||...:|.||...|.:|..|||.     |....:|..:....||
Mouse   104 CPERCSFSSWAEHRRRHQRACGLLTADGEEWQRLRSLLAPLLLRPQAAAGYAGTLDNVVRDLVRR 168

  Fly   187 MVDQWKRRTAEAAAIP---LAESGEIRSYELPLLEQQLYRWSIEVLCCIMFGTSVLTC--PKIQS 246
            :    :|:....:.:|   |..:||            .|::.:|.:..::.| |.|.|  .::..
Mouse   169 L----RRQRGRGSGLPGLVLDVAGE------------FYKFGLESIGAVLLG-SRLGCLEAEVPP 216

  Fly   247 SLDYFTQIVHKVFEHSSRLMTFPPRLAQILRLPIW----RDFE-----ANVDEVLREGAAIIDHC 302
            ..:.|...|..||..:...|..|..|..::..| |    ||::     |.....||||.|.:.:.
Mouse   217 DTETFIHAVGSVFVSTLLTMAMPNWLHHLIPGP-WARLCRDWDQMFAFAQRHVELREGEAAMRNQ 280

  Fly   303 IRVQEDQRRPHDEALYHRLQAADVPGDMIKRIFVDLVIAAGDTTAFSSQWALFALSKEPRLQQRL 367
            .:.:||.  |....|.|.|....|....|.....:|::|..||.:.:..|.|:.||:.|.:|..|
Mouse   281 GKPEEDM--PSGHHLTHFLFREKVSVQSIVGNVTELLLAGVDTVSNTLSWTLYELSRHPDVQTAL 343

  Fly   368 AKE--------------RATNDSRLMHGLIKESLRLYPVAPFIGRYLPQDAQLGGHFIEKDTMVL 418
            ..|              .|.:...|:..:|||.||||||.|...|...:|.::|.:.|.:||:|.
Mouse   344 HSEITAGTRGSCAHPHGTALSQLPLLKAVIKEVLRLYPVVPGNSRVPDRDIRVGNYVIPQDTLVS 408

  Fly   419 LSLYTAGRDPSHFEQPERVLPERWCIGETEQVHKSHGSLPFAIGQRSCIGRRVALKQLHSLLGRC 483
            |..|...|||:.|..|....|.|| :||....| ...||||..|:|||||||:|..:|...|.:.
Mouse   409 LCHYATSRDPTQFPDPNSFNPARW-LGEGPTPH-PFASLPFGFGKRSCIGRRLAELELQMALSQI 471

  Fly   484 AAQFEMSCLNE---MPVDSVLRMVTVPDRTLRL 513
            ...||:  |.|   :|:..:.|.|.||:|::.|
Mouse   472 LTHFEV--LPEPGALPIKPMTRTVLVPERSINL 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sadNP_650123.1 CYP24A1-like 91..512 CDD:410677 132/456 (29%)
Cyp27b1NP_034139.2 CYP27B1 68..502 CDD:410741 132/458 (29%)

Return to query results.
Submit another query.