DRSC/TRiP Functional Genomics Resources

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Protein Alignment ru and RHBDL1

DIOPT Version :10

Sequence 1:NP_524790.1 Gene:ru / 44856 FlyBaseID:FBgn0003295 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_016879338.1 Gene:RHBDL1 / 9028 HGNCID:10007 Length:469 Species:Homo sapiens


Alignment Length:362 Identity:100/362 - (27%)
Similarity:142/362 - (39%) Gaps:109/362 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLSGAPSQGRRPKNRPLIGT------VEEGEMPPSTVLQMPPAPL--------SSKSGLVLGVCC 53
            |..|:..|...|:|...||.      |...|:|      :.||.|        |::.|   .||.
Human    71 LAGGSSLQQLDPENTGFIGADTFTGLVHSHELP------LDPAKLDMLVALAQSNEQG---QVCY 126

  Fly    54 DQLMAVQPVQRASGAAATKSNSPDWGNHRAKHHEGSAAPF------------------------- 93
            .:|:.:...:|:|......:|     ..||...:|   |.                         
Human   127 QELVDLISSKRSSSFKRAIAN-----GQRALPRDG---PLDEPGLGVYKRFVRYVAYEILPCEVD 183

  Fly    94 -KWI--------PPFFIILATLLEVLVFLWVGAD---------PPE--DSLLVYRPDQRLQLWRF 138
             :|.        ||.|:...||.:::|||..||.         .||  .|.|||.|..|.:.|||
Human   184 RRWYFYRHRSCPPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRF 248

  Fly   139 LSYALLHASWLHLGYNVLTQLLFGVPLELVHGSLRTGVIYMAGVLAGSLGTSVVDSEVFLVGASG 203
            |:|..:|.....||:|.|.||:.|||||:|||.||..::|:||||| .||...:..:|...||..
Human   249 LTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLA-ELGWDEMSLQVAEDGAGL 312

  Fly   204 GVYALLA--AQLASLL-----------LNFGQMRHGVIQLMAVILFVFCDLGYALYSRELAMHQL 255
            ||:.|..  .::|:||           |:....|.|               |...:..:   |..
Human   313 GVHELRGGPGRVAALLPAAARLGPTAQLHGAPGRRG---------------GGGEHGPD---HPA 359

  Fly   256 QTRPSVSYIAHMTGALAGISVGLLLLRQLDGGLRPRP 292
            :.|.:.:....:.|..||:. .|..||:|...||.||
Human   360 ELRGAPAGPVRLVGGAAGLR-HLPALRRLLERLRLRP 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ruNP_524790.1 Rhomboid 129..283 CDD:426384 52/166 (31%)
RHBDL1XP_016879338.1 Rhomboid 239..>294 CDD:451297 28/54 (52%)

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