Protein Alignment ru and PCP1

DIOPT Version :9

• Sequence 1: NP_524790.1
• Gene: ru / 44856
• FlyBaseID: FBgn0003295
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_011615.1
• Gene: PCP1 / 852993
• SGDID: S000003333
• Length: 346
• Species: Saccharomyces cerevisiae
• Alignment Length: 271
• Identity: 63/271 - (23%)
• Similarity: 95/271 - (35%)
• Gaps: 106/271 - (39%)

  Fly    88 GSAAPFKWIPPFF--------IILATL-LEVLVF-LWVGADPPEDSLLVYRPDQRLQLWRFL-SY 141
            ||...|:.:|||.        ::.|.| :.|.|| ||                |..:.|||| .|
Yeast   124 GSPYLFEHVPPFTYFKTHPKNLVYALLGINVAVFGLW----------------QLPKCWRFLQKY 172

  Fly   142 ALL-----------------HASWLHLGYNVLTQLLFGVPLELVHGSLRTGVIYMAGVLAGSLGT 189
            .||                 |..:.|||.|:|....||..|..:.|:.....:||...:||||.:
Yeast   173 MLLQKDYVTSKISIIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFS 237

  Fly   190 ---------SVVDSEVFLVGASGGVYALLAAQLASLLLNFGQMRHGVIQLMAVILFVF------- 238
                     ::|...   :||||.::.:|..  .|.|....:          ::||||
Yeast   238 LWYPKLARLAIVGPS---LGASGALFGVLGC--FSYLFPHAK----------ILLFVFPVPGGAW 287

  Fly   239 -------------CDLGYALYSRELAMHQLQTRPSVSYIAHMTGALAGISVGLLLLRQLDGGLRP 290
                         |.|.:.               |..|.||:.|::.|:..|..:.:.::   :.
Yeast   288 VAFLASVAWNAAGCALRWG---------------SFDYAAHLGGSMMGVLYGWYISKAVE---KQ 334

  Fly   291 RPLRWLALGVW 301
            |..|..|.|.|
Yeast   335 RQRRLQAAGRW 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ru	NP_524790.1	Rhomboid	129..282	CDD:279958	45/199 (23%)
PCP1	NP_011615.1	Rhomboid	186..329	CDD:396315	37/172 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0705
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810