Protein Alignment ru and rbd3

DIOPT Version :10

• Sequence 1: NP_524790.1
• Gene: ru / 44856
• FlyBaseID: FBgn0003295
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_596184.1
• Gene: rbd3 / 2541325
• PomBaseID: SPBP4H10.10
• Length: 392
• Species: Schizosaccharomyces pombe
• Alignment Length: 114
• Identity: 32/114 - (28%)
• Similarity: 46/114 - (40%)
• Gaps: 31/114 - (27%)

  Fly   198 LVGASGGVYALLAAQLASL-------LLNFGQMRHGVIQLMAVIL-FVFCDLGYALYSRELAMHQ 254
            |:||||.||| .||..|.|       |.....::.|:...:..|. :|.|.|.|     |...|
pombe   288 LLGASGAVYA-TAAIFACLFPYTEFFLFFVYPVKAGIFMPLDFIAEYVLCLLNY-----EKKFH- 345

  Fly   255 LQTRPSVSYIAHMTGALAGISVGLLLLRQLDGGLRPRPLRWLALGVWCI 303
                  |::.||::|...|:...|.||          |..|....::|:
pombe   346 ------VAFDAHVSGTFFGVVSSLFLL----------PAMWKRRSLYCV 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ru	NP_524790.1	Rhomboid	129..283	CDD:426384	29/92 (32%)
rbd3	NP_596184.1	GlpG	164..373	CDD:440469	31/107 (29%)