DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ru and stet

DIOPT Version :10

Sequence 1:NP_524790.1 Gene:ru / 44856 FlyBaseID:FBgn0003295 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_313932.4 Gene:stet / 1274741 VectorBaseID:AGAMI1_010126 Length:458 Species:Anopheles gambiae


Alignment Length:252 Identity:135/252 - (53%)
Similarity:187/252 - (74%) Gaps:10/252 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 PPFFIILATLLEVLVFLW----VG-ADP----PEDSLLVYRPDQRLQLWRFLSYALLHASWLHLG 152
            ||.|:||.|.:|:..|::    :| |||    |.||:.:||||:|.::||||.|.:|||.|.|||
Mosquito   207 PPLFVILVTFVELGFFVYHSLTLGPADPAGPVPIDSMFIYRPDKRQEVWRFLFYMVLHAGWFHLG 271

  Fly   153 YNVLTQLLFGVPLELVHGSLRTGVIYMAGVLAGSLGTSVVDSEVFLVGASGGVYALLAAQLASLL 217
            :|::.|||.|:|||:||||.|.|.:|:||||||||||||.|.||:||||||||||||||.||:::
Mosquito   272 FNLIIQLLVGLPLEMVHGSTRIGCVYLAGVLAGSLGTSVFDPEVYLVGASGGVYALLAAHLANVM 336

  Fly   218 LNFGQMRHGVIQLMAVILFVFCDLGYALYSRELAMHQLQTRPSVSYIAHMTGALAGISVGLLLLR 282
            ||:..|::|:::|:|:.||..||:|:|:||| .::......|||||:||:||||||:::|||:|:
Mosquito   337 LNYRNMQYGILRLLAIFLFASCDVGFAIYSR-YSVEPASGAPSVSYVAHLTGALAGLTIGLLVLK 400

  Fly   283 QLDGGLRPRPLRWLALGVWCIFSAFGIAFNLVNTVTAQLLAEEEGQVIRQHLMNDLG 339
            ..:..|..:.|.|:||||:...:.|.|.|||:||||.|.|.||..:|.:|||..:.|
Mosquito   401 NFEQKLHEQLLWWVALGVYAACTIFAIVFNLLNTVTVQRLEEESEEVFKQHLFTNFG 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ruNP_524790.1 Rhomboid 129..283 CDD:426384 93/153 (61%)
stetXP_313932.4 Rhomboid 248..400 CDD:426384 92/152 (61%)

Return to query results.
Submit another query.