DRSC/TRiP Functional Genomics Resources

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Protein Alignment rib and Zbtb34

DIOPT Version :10

Sequence 1:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001386526.1 Gene:Zbtb34 / 689174 RGDID:1596130 Length:518 Species:Rattus norvegicus


Alignment Length:558 Identity:112/558 - (20%)
Similarity:182/558 - (32%) Gaps:194/558 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SGEVGQTYCLRWN--NHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILK 73
            |||:..:..::::  .|.:.::..|:.|...|...|..:.:..:.|:||:.||||:||||     
  Rat    16 SGEMDSSSFIQFDVPEHSSTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYF----- 75

  Fly    74 DVPQDHCSIILPGVKGFEIAA---------LLQYMYTGETTVTKSQEPEILRTAKELQVKGLYD- 128
               :||.:  |..:.|..|:.         ||.:.|||..::........|..|..||::.:.| 
  Rat    76 ---RDHSA--LSTMSGLSISVIKNPSVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDK 135

  Fly   129 --NLMKFNHASV--------------TPTSSSGAGGAKPQNGSASNHSSSVISTSTHISPSAAIS 177
              .:::..|:.:              ||.|.:|                 |...|...||     
  Rat   136 CTQILESIHSKISVGDVDSVTIGAEETPESRNG-----------------VKDGSFFTSP----- 178

  Fly   178 SSCSPPPPPQFGYQPGYSHYPQQQPMSAS---QIPAGEAPLTPTQATPHSAASGAGEAG------ 233
            ...|||..||.          :|.|:|:.   :....:|..:..|...||....:|...      
  Rat   179 VEISPPYCPQV----------RQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEVQI 233

  Fly   234 ------GQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSM--------LLSGNRDTPI--- 281
                  |...:..|       .:.|....|....|...|..||:        ::.|.:...:   
  Rat   234 EGDHEQGDLLVRES-------QITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 291

  Fly   282 -LRNVLAQANPAD--SSQP--------GPMNANGEKT----------------PTHPHQNTQLPA 319
             ..:||..|.|..  :|||        |..|::..::                ..|.|.:.|   
  Rat   292 TYGSVLQHAYPYSQAASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSDLQ--- 353

  Fly   320 GLGVSGGERNHSFNGSDYGGDKEPLS------PYTDRSFEEETGQSGGKKPEWKRY--------- 369
            |: |.|.:.....|...|.......|      ||.:|......|:|..:|....|:         
  Rat   354 GV-VQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITP 417

  Fly   370 -------KQYTRADMMCAIQAVREGMSALQASRKYGL-------PSR------------TLYDKV 408
                   |:|||.|.:                 :|.:       |.|            ||...:
  Rat   418 FVCKFCGKKYTRKDQL-----------------EYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHL 465

  Fly   409 RKLN--ITTGRGTHRTPKRSPPGAESSQGFSYSAAAAA 444
            ||.:  :|.|||...:|:|:....|.......||:..|
  Rat   466 RKNHPGVTEGRGRMESPERTDVYGEQKLESDASASEMA 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ribNP_001261085.1 BTB_POZ_BAB-like 42..125 CDD:349624 26/91 (29%)
HTH_psq 373..417 CDD:283007 11/64 (17%)
Zbtb34NP_001386526.1 BTB_POZ_ZBTB34 25..144 CDD:349529 31/128 (24%)
ZnF_C2H2 390..412 CDD:197676 4/21 (19%)
C2H2 Zn finger 392..412 CDD:275368 4/19 (21%)
zf-H2C2_2 404..429 CDD:463886 3/24 (13%)
C2H2 Zn finger 420..440 CDD:275368 6/36 (17%)
zf-H2C2_2 433..455 CDD:463886 3/38 (8%)
zf-C2H2 446..467 CDD:395048 3/20 (15%)
C2H2 Zn finger 448..466 CDD:275368 2/17 (12%)

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