DRSC/TRiP Functional Genomics Resources

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Protein Alignment rib and mamo

DIOPT Version :10

Sequence 1:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_061514644.1 Gene:mamo / 5666833 VectorBaseID:AGAMI1_006404 Length:1768 Species:Anopheles gambiae


Alignment Length:781 Identity:184/781 - (23%)
Similarity:259/781 - (33%) Gaps:236/781 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDD-EQFQAHRVVLAANSPYFQHILKDVPQDHCS 81
            |||||||||:||:.:...|.:..|.||.:|...: ...:||:|||:|.|.|||.:..|.|..|..
Mosquito     6 YCLRWNNHQSNLLGVFSQLLQDESLVDVTLACSEGASIRAHKVVLSACSSYFQTLFLDHPARHPI 70

  Fly    82 IILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYD--------NLMKFNHASV 138
            :||..|:..|:..|:::||.||..|...|...:|:|||.|:||||.:        ...|.....:
Mosquito    71 VILKDVRFAELRTLIEFMYKGEVNVEYCQLSALLKTAKSLKVKGLTEMTNQSSPLTEPKLEPERL 135

  Fly   139 TPTSSSGAGGA------------------------KPQN-------------------------- 153
            .|.||.||||.                        .|.|                          
Mosquito   136 RPHSSHGAGGGVGATGGSNSGSGSGGTTLAASEAILPTNLSTTLPTATLAGGGGGPYLTSTTTTA 200

  Fly   154 --GSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYS--------------HY-PQQQ 201
              |:||...|:..:|:|....|::.:::.:....|....:|..:              || .|||
Mosquito   201 TPGAASTTVSTTATTATTTGSSSSTTTTTTTTSEPDGADRPAAAEQQQQHHQQHSQQHHYTTQQQ 265

  Fly   202 PMSASQIPAGEAPLTPT---QATPHSAASGAGEAGGQWPL--TPSAAAAMLNSVYESAA------ 255
            .:|:|.|  |.|.:|..   .::..|::||...||....|  |....|||:.....|.|      
Mosquito   266 RLSSSGI--GSASVTSASSLSSSSSSSSSGTATAGNVTDLSTTHGKDAAMVCEADASTAAAPSAT 328

  Fly   256 -DMNPLKRKKLSAISSMLLSGNRDTPI--------LRNVLAQANPADSSQ--------------- 296
             ...||         |:|...:||.||        |.:..|.|..:.::|               
Mosquito   329 TTTTPL---------SLLTRKHRDAPIDIATATTALSSASAAAVTSSAAQLHGGGGGAVGSKGSS 384

  Fly   297 -----PGPMNANGEKTPTHPHQNTQLPA-GLGVSGGERNHSFNGSDYGGDKEPL---SPYTDRSF 352
                 ...::::...:.|......|.|| |.|:...:...|...||......||   .|..:...
Mosquito   385 SSFTSVAALSSSSSSSSTTTTTVIQRPASGDGILSSQLAASAVSSDGRRSATPLHDEPPSREEEE 449

  Fly   353 EEETGQS-GGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTG 416
            .||..|. ..:.|:..|    |...:..|:...|:                         ..||.
Mosquito   450 PEEMEQEVNDRHPQDAR----TTPTIGAALDDERD-------------------------TTTTA 485

  Fly   417 RGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYGHGHGHHSEVKRDQKVDHVPAHHGMPPTI--- 478
            ..|..|.......|..|......|....|:...|.| |...|.....:    ||..|.|.|.   
Mosquito   486 TTTTTTTVSDKADAHQSAHQERGARIGTASPPAGSG-GDTDECAASDE----PAAAGDPVTACCS 545

  Fly   479 ---------PPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSSSPAEMDQR 534
                     |..||.:.|.:..:.:......|...|.|..|.|.||||.|||...:....:.|..
Mosquito   546 TSIAERQPSPAPAALIPDSSLSRSSPLGELVDEVRRPASSAAAAAAAAAAAALMATDLRTDTDHH 610

  Fly   535 SNGHGM--RSPSPQGRHYPHEQEAMDLEMEKHEQNIIKRERDQDEREDADD-------------- 583
               |.|  |..:.....|..|:|              :.|.|:||.||.||              
Mosquito   611 ---HAMLLRDVTMGTADYDDEEE--------------EEEEDEDEGEDVDDGAAEMLLAAAAVAQ 658

  Fly   584 ------------------EEDHEQEHVEDLSLARKERPPSPYSPQPTEAGAGVIMHASSASANGK 630
                              ||..||..       |:.|.|...|.:|.|.......|...:...|.
Mosquito   659 VAREARDEGTDAIVIGTSEESAEQRR-------RRGRRPLTASDEPEEEANEEQQHRHRSRRTGP 716

  Fly   631 D 631
            |
Mosquito   717 D 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ribNP_001261085.1 BTB_POZ_BAB-like 42..125 CDD:349624 33/83 (40%)
HTH_psq 373..417 CDD:283007 5/43 (12%)
mamoXP_061514644.1 None

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