DRSC/TRiP Functional Genomics Resources

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Protein Alignment rib and bab2

DIOPT Version :9

Sequence 1:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster


Alignment Length:933 Identity:205/933 - (21%)
Similarity:302/933 - (32%) Gaps:325/933 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHIL 72
            |..||| ||.:||||||:|:||..:...|.:..|:||.:|..:....:||::||:|.|||||.:.
  Fly   189 VPPSGE-GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALF 252

  Fly    73 KDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHAS 137
            .|.|..|..||:..|...::.||:::||.||..|.:.|...:|:.|:.|:::||         |.
  Fly   253 YDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGL---------AE 308

  Fly   138 VTPTSSSGAGGAKPQNGSASNHSSSVISTST--------------------HISPSAAI------ 176
            |:.....|...|.|.:..........::::|                    .:.|...:      
  Fly   309 VSAGRGEGGASALPMSAFDDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQ 373

  Fly   177 ------SSSCSPPPPPQFGYQ----------PGYSHYPQQQP--MSASQIP----AGEAPLT--- 216
                  .|..:|.|..|.|..          ||.|   |.||  |:.|.|.    |...|.|   
  Fly   374 RKRSRDGSYATPSPSLQGGESEISERGSSGTPGQS---QSQPLAMTTSTIVRNPFASPNPQTLEG 435

  Fly   217 ----------------PTQATPHS-AASGA------GEAGGQWPLTPSAAAAM---LNSVYESAA 255
                            || ||.|| ..|||      |....|..|.|..||.:   .::::..|.
  Fly   436 RNSAMNAVANQRKSPAPT-ATGHSNGNSGAAMHSPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQ 499

  Fly   256 DMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQNTQLPAG 320
            .:         |....|...:.....|....|.|..|.:...|..:.:|...||         .|
  Fly   500 QL---------AAQHQLAHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPT---------GG 546

  Fly   321 LGVSGGERNHSFNGSDYGG--DKEPLSPYTDRSFEE-------ETGQSGG--------------- 361
            .||:|     |..|:..|.  |...:.|.......|       |:|..||               
  Fly   547 TGVAG-----SGAGAAVGSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGAASVA 606

  Fly   362 -------KKPEWKR--------------------YKQYTRADMMCAIQAV-REGMSALQASRKYG 398
                   .:..|::                    .|.:....|..||.:| :||:|..||:||:.
  Fly   607 ADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFD 671

  Fly   399 LPSRT--LY-DKVRK-LNITTGRGTHRTPK-RSPP------------------------------ 428
            :|..|  || ::|.. |..:...|....|| |..|                              
  Fly   672 IPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKE 736

  Fly   429 ------------------GAESSQGFSYSAAAAAAAHNYG------------------------- 450
                              |..::.|:..:|||..||.|..                         
  Fly   737 DMSAHQYANGQGHGTYIGGGTTTNGYHSAAAAKLAAQNAALAPPDAGSPLSSMTETLRRQILSQQ 801

  Fly   451 --HGHGHHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQA-LENRGGDMAGREALHAMA 512
              |...|..:....|:    |:||........|.......|:||:: :|::      ..|..|:|
  Fly   802 QQHQQHHQQQAHHQQQ----PSHHQQQSPHAQSMNMYKSPAYLQRSEIEDQ------VSAAAAVA 856

  Fly   513 LAAAAH---------------AAANRLSSSPA--EMDQRSNGHGMRSPSPQGRHYPHEQEAMDLE 560
            .|||.|               .:|..|...|.  .|..|.:|.|      .|...|:...:...|
  Fly   857 AAAAKHQQQQGERRGSENLPDLSALGLMGLPGLNVMPSRGSGGG------SGGAAPNSAASYARE 915

  Fly   561 MEKHEQNIIKRERDQD-EREDADDEEDHEQEHVEDLSLARKERP--PSPYSPQPTEAGAGVIMHA 622
            :.:..:...:|||::: .|:................||...:||  .||||      .|....|.
  Fly   916 LSRERERDRERERERELSRQYGSQSRGSSSGSGSAKSLTASQRPGAASPYS------AAHYAKHQ 974

  Fly   623 SS-----------------ASANGKDHVDYPSSPQFV-----PIGLKRELMEGEDAQARA----- 660
            :|                 |.|||........||:|.     |.....||....||.|.|     
  Fly   975 ASAYNKRFLESLPAGIDLEAFANGLLQKSVNKSPRFEDFFPGPGQDMSELFANPDASAAAAAAAY 1039

  Fly   661 ---------DXLTLTMAWQYATD 674
                     ..:.:.:..|:||:
  Fly  1040 APPGAIRESPLMKIKLEQQHATE 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ribNP_001261085.1 BTB 33..133 CDD:279045 34/99 (34%)
BTB 44..133 CDD:197585 31/88 (35%)
HTH_psq 373..417 CDD:283007 17/48 (35%)
bab2NP_523879.2 BTB 213..309 CDD:279045 35/104 (34%)
BTB 224..309 CDD:197585 32/93 (34%)
HTH_psq 645..690 CDD:283007 17/44 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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