DRSC/TRiP Functional Genomics Resources

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Protein Alignment rib and CG15812

DIOPT Version :9

Sequence 1:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster


Alignment Length:444 Identity:86/444 - (19%)
Similarity:164/444 - (36%) Gaps:116/444 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LRWNNHQTNLVQILHALHEVGSYVDCSLVV---DDEQFQAHRVVLAANSPYFQHILKDVPQ-DHC 80
            |:|..|.:.::.|..:|.....:  |.:|:   |..:.:||..||:..|...:::|.|||: ...
  Fly     4 LKWMGHSSTIMDIQRSLRNDNQH--CEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEA 66

  Fly    81 SIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSG 145
            :|:||.::|..:..:|.::|.|||::..:..||.|.....|.:|    :.:.|   ...|::|  
  Fly    67 TIMLPDIRGDLLECMLSFIYMGETSLPSASLPEFLEAINLLGIK----SAISF---ECNPSAS-- 122

  Fly   146 AGGAKPQNGSASNHSSSVIS----TSTHISPSAAISSSCSPPPPPQFGYQP-----GYSHYPQQQ 201
                 |.:....|||.:|.|    |...|:.:..:.....|.|....   |     |..|.|...
  Fly   123 -----PPSVDVENHSLAVESAKSITGLQIAEAELLDDEEEPHPMVSV---PATTLAGSQHQPSHS 179

  Fly   202 PMSASQIPAGEAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLS 266
            ..|...|...|.|.. |.:..|...|   .:|.|:.||.:....   ::.:||:.::.::..:..
  Fly   180 SRSLEYIDVYEPPKI-TYSIEHMDGS---SSGNQFILTENTGTF---TITQSASSLSKIEADETG 237

  Fly   267 AISSMLLSGNRD-------------TPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQNTQLP 318
            ...:.:..|:.|             :.::....|||:|.                      .:|.
  Fly   238 TSGAEVDLGDDDVDADLAEDSEEHESQMIDEEFAQADPL----------------------MELE 280

  Fly   319 AGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKR--------------- 368
            |              |::...|.:......|...:::..:.||.|...:|               
  Fly   281 A--------------GTEMDDDDDVHDQLVDEEIDDKPRKLGGGKTRIRRPISAKAVKRLSDCKP 331

  Fly   369 --------YKQYTRADM-----MCAIQAVREGMSALQASRKYGLPSRTLYDKVR 409
                    .|:..:.|:     :.|...:.||:|..:|:.::.:....|:.:||
  Fly   332 TRIQQFAALKREVKDDINDALDLAADAVIIEGLSLQKAADRFDISKTVLWRRVR 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ribNP_001261085.1 BTB 33..133 CDD:279045 27/103 (26%)
BTB 44..133 CDD:197585 26/92 (28%)
HTH_psq 373..417 CDD:283007 9/42 (21%)
CG15812NP_523897.2 BTB 20..113 CDD:279045 27/98 (28%)
BTB 35..118 CDD:197585 25/89 (28%)
HTH_psq 348..392 CDD:283007 8/38 (21%)
HTH_psq 458..501 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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