Protein Alignment rib and psq

DIOPT Version :9

• Sequence 1: NP_001261085.1
• Gene: rib / 44855
• FlyBaseID: FBgn0003254
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: NP_001369078.1
• Gene: psq / 36118
• FlyBaseID: FBgn0263102
• Length: 1170
• Species: Drosophila melanogaster
• Alignment Length: 828
• Identity: 185/828 - (22%)
• Similarity: 283/828 - (34%)
• Gaps: 258/828 - (31%)

  Fly    16 QTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHC 80
            |.:.|||||:|..:..:...|.|..|:||.:|..:....:||:|||:|.|.|||.:|.:.|..|.
  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHP 72

  Fly    81 SIILPGVKGF-EIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSS 144
            :||||....| ::..::.::|.||..||:|:...:||||::|::|||.:.
  Fly    73 TIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCET--------------- 122

  Fly   145 GAGGAKPQNGSASNHSSSVISTSTHISPSAA--ISSSCSPPPPPQFGYQPGYSHYPQQQPMSA-- 205
             |..|...|.:|    ::.|:.|.:|..:..  |.::...|..|....:....|:.|||...|
  Fly   123 -AENADDLNDAA----TATITVSENIQQAVVGNIVNAAIVPGAPSPSLEQQQQHHQQQQQQQAQE 182

  Fly   206 ----SQIPAGEAPLTPTQ-----ATPHSAASGAGEAGGQWPLTPSAAAAMLNSV------YESAA 255
                .|:.|.:......|     .|.|..:||:....||  |..|:|:....|:      .::.:
  Fly   183 QHQQQQVHAQQQQQQQQQINAALLTQHGVSSGSVSLSGQ--LLSSSASGSSGSLAGGQQASQTPS 245

  Fly   256 DMNP------LKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPG---------------- 298
            .:.|      |||.|...:||...:|:.......:...|..||....|.
  Fly   246 GLQPTPRKSRLKRSKSPDLSSGGGAGSSGGSSSGSTQQQPQPAHHHHPQTILIQGQNPNSIVSLQ 310

  Fly   299 --------PMNANGEKTPT--HPHQNTQLPAGLGVSGGERNHSFNGS-----DYGGDKEP----- 343
                    |::.:|:.:..  |.|::..   |.|...|...|....|     |:..:.:|
  Fly   311 QTADGNYIPVSGSGDDSDAEDHEHEHNH---GHGHGHGGHTHGHGHSHEHSHDHEHEHKPNKICK 372

  Fly   344 -----LSPYTDRS--FEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREG-----MSALQASRK 396
                 .||.::.|  .....|.||...         |...::..|...|:|     |::|.....
  Fly   373 TEHSVASPASNSSSASNNAAGVSGVTS---------TGQAIVTQIVVARDGKDTKNMTSLGMGMN 428

  Fly   397 YGL----------------PSR---TLYDKV----------RKLNITT---------GRGTHR-- 421
            .||                ||.   |:.:.|          |.|:.||         .:..||
  Fly   429 GGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNTTEPLDIDNHLAQQIHRLD 493

  Fly   422 -TPKRS----PPGAES-------------------SQGFSYSAAAAAAAHNYGH-GHGHHSEVKR 461
             :|..|    ..|.||                   :|..:.|.|....||:..| .|..|.:.:.
  Fly   494 QSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLAAQHHALSQAQQQHAHHQAHQQHQQHQQQQH 558

  Fly   462 DQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSS 526
            .|:..|:.|..            ||..:.|||..:.:.......:.....|.||||.|..
  Fly   559 QQQQQHLHAQQ------------LLAQSQLQQQQQQQQQQQQHHQQQQQQAAAAAAAAGV----- 606

  Fly   527 SPAEMDQRSNGHGMRSPSPQGRHYPHEQEAMDLEME------KHEQNIIKRER------------ 573
                       ||.     .|.|..|........||      |||..:|....
  Fly   607 -----------HGQ-----HGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDM 655

  Fly   574 -DQDEREDA---------DDEEDH----EQEHVEDLSLARKERPPSPYSPQPTEAGAGVIMHASS 624
             :.|..||:         |.:|.|    :|:|....|:.         .|.|..||.|..|...:
  Fly   656 YNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVC---------GPGPGGAGGGGGMSGGA 711

  Fly   625 ASANGKDHVDYPSSPQFVPIGLKRELMEGEDAQARADXLTLTMAWQYA 672
            .|.:|:..:|          .||.:.|....|.| .. :..|..||.|
  Fly   712 GSGSGEKALD----------ALKNQNMSLTKASA-IYGIPSTTLWQRA 748

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rib	NP_001261085.1	BTB	33..133	CDD:279045	38/100 (38%)
		BTB	44..133	CDD:197585	34/89 (38%)
		HTH_psq	373..417	CDD:283007	16/86 (19%)
psq	NP_001369078.1	BTB_POZ_BAB-like	34..118	CDD:349624	32/83 (39%)
		HTH_psq	717..>747	CDD:283007	8/40 (20%)
		HTH_psq	767..804	CDD:283007
		HTH_psq	821..866	CDD:283007
		HTH_psq	873..916	CDD:283007

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I10615
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1229475at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23110
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	4.020