Protein Alignment rib and ab

DIOPT Version :10

• Sequence 1: NP_001261085.1
• Gene: rib / 44855
• FlyBaseID: FBgn0003254
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: NP_476562.1
• Gene: ab / 34560
• FlyBaseID: FBgn0264442
• Length: 904
• Species: Drosophila melanogaster
• Alignment Length: 818
• Identity: 184/818 - (22%)
• Similarity: 286/818 - (34%)
• Gaps: 254/818 - (31%)

  Fly    16 QTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHC 80
            |.|.|:||:.|::::.....|.:...:||.:|..|:..|.||:|||:|.||||:.:||..|.:|.
  Fly    76 QHYALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLKANPCEHP 140

  Fly    81 SIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYD-----NLMKFNHASVTP 140
            .:||..|:..::..||.:||.||..|:..|.|:.|:||..||::||.|     ...|...|:::.
  Fly   141 IVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLADVNGGYPYSKALSAALSH 205

  Fly   141 TSSSGAGGAKPQNGSASNH---------SSSVISTSTHISP---SAAISSSCSPPPPPQFGYQPG 193
            .||:........|.|.||:         ||:....|:::||   |||.::|.:         ...
  Fly   206 NSSNNNNNNSSSNNSLSNNNNNNNNNAESSNHNKISSYLSPNQTSAACNNSSN---------SNS 261

  Fly   194 YSHYPQQQPMSASQIPAG-----EAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYES 253
            .:|.......|::.|...     .:|.:..|..|...||.|..|        :||||.|.:...:
  Fly   262 NNHSSSHNNSSSNNISGSLNSSLNSPFSAPQIPPPVTASSAAAA--------AAAAASLTAAVAA 318

  Fly   254 AADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQ--ANPADSSQPGPMNANGEKTPTHPHQNTQ 316
            ||..........|:.:|...||   ||.::.:.|.  |:|..:..|.|..|:..
  Fly   319 AAAATAASAGSSSSAASGQTSG---TPAIQELKASSAASPVRNPNPNPSKASSS----------- 369

  Fly   317 LPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAI 381
                        ||...|...|..|..|:|                 |..||.|.   ||:..|
  Fly   370 ------------NHWDMGEMEGSRKSHLTP-----------------PPQKRIKS---ADLFRA- 401

  Fly   382 QAVREGMSALQASRKYGLPSRTLYDKVRKLNIT---------TGRGTHRTPKRSPPGAESSQGFS 437
               :.|:|          |.|.|.|  |:..:.         :||.|.:..:|:....||..|.:
  Fly   402 ---QHGIS----------PERLLLD--REFPVAGQHPLTRNRSGRDTSKDRERNLELRESLLGQA 451

  Fly   438 Y---SAAAAAAAHNYGHGHGHHSEVKRDQKVDHVPAHH-----------------------GMPP 476
            .   :...|...|..|...|..|.....:..|.....|                       |:|.
  Fly   452 LENSNGQQANPKHELGQSAGEDSNSSDTEPSDRGDGQHDGTLDGIDNQRSHSFPNAFLGLQGIPG 516

  Fly   477 TIP---------------------------PSAAALLDHAF-LQQALENR------------GGD 501
            .:|                           |....:...|. |:..||::            |..
  Fly   517 LLPGPSGINSDFVSRRSLEMRVRATDPRPCPKCGKIYRSAHTLRTHLEDKHTVCPGYRCVLCGTV 581

  Fly   502 MAGREALHA------------------MALAAAAHAAANRLSS-----SPAEMDQRSNGHGMRSP 543
            ...|.:||:                  |..|.....|:..|:.     ||||:..|::..|....
  Fly   582 AKSRNSLHSHMSRQHRGISTKDLPVLPMPSAFDPELASRLLAKAGVKISPAELRARASPTGGSGS 646

  Fly   544 SPQGRHYPHEQEAMDLEMEKHEQNIIKRERDQDEREDADDE-ED-------------------HE 588
            |..|......|..:||....        ....|:.||:||: ||                   :.
  Fly   647 SGGGGGGGSSQAKLDLSNAS--------GGPMDDAEDSDDDPEDLTTGNGLYGMGGSSSDLSRYH 703

  Fly   589 QEHVEDLSLARKERPPSPYSP------QPTEAGAGVIMHASSASANGKDHVDYPSSPQFVP---- 643
            :..:.:...||.....:..:.      ||.:.|    :...:::|.|:..:|  :..||:.
  Fly   704 ESLLSNFGHARMRNEAAAVAATAAALGQPKDLG----VQLPNSNAPGQSLLD--TYLQFITENTF 762

  Fly   644 -IGLKRELMEGEDAQARADXLTLTMAWQYAT-DSLDSL 679
             :|:.:|       ||.|..|...||...|. .|||:|
  Fly   763 GMGMSQE-------QAAAAALRAKMAQLNAMGHSLDNL 793

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rib	NP_001261085.1	BTB_POZ_BAB-like	42..125	CDD:349624	36/82 (44%)
		HTH_psq	373..417	CDD:283007	10/52 (19%)
ab	NP_476562.1	BTB_POZ_BAB-like	102..185	CDD:349624	36/82 (44%)
		zf-Di19	545..597	CDD:428539	9/51 (18%)
		C2H2 Zn finger	546..567	CDD:275371	5/20 (25%)
		C2H2 Zn finger	575..596	CDD:275371	4/20 (20%)